Literature DB >> 21429142

CorrSieve: software for summarizing and evaluating Structure output.

M G Campana1, H V Hunt, H Jones, J White.   

Abstract

The clustering software Structure has been used extensively to infer population structure in natural populations from multilocus genotype data. Determining meaningful values of K, the assumed number of subpopulations is one of the primary challenges of making biological inferences from Structure data. The package CorrSieve summarizes Structure output and performs a number of tests, including both previously reported methods and novel ones, to help determine meaningful values of K.
© 2010 Blackwell Publishing Ltd.

Mesh:

Year:  2010        PMID: 21429142     DOI: 10.1111/j.1755-0998.2010.02917.x

Source DB:  PubMed          Journal:  Mol Ecol Resour        ISSN: 1755-098X            Impact factor:   7.090


  21 in total

1.  Pleistocene speciation in the genus Populus (salicaceae).

Authors:  Nicholas D Levsen; Peter Tiffin; Matthew S Olson
Journal:  Syst Biol       Date:  2012-01-02       Impact factor: 15.683

2.  Development and characterization of ten novel microsatellite loci for the emu (Dromaius novaehollandiae) and genetic diversity of Japanese farm populations.

Authors:  Yuichi Koshiishi; Michiko Murata-Okubo; Shin-Ichiro Fujisawa; Gaku Shimoi; Hiroki Hirayama; Yuichi Kameyama; Kousaku Souma; Kenta Wada
Journal:  Mol Biol Rep       Date:  2020-02-21       Impact factor: 2.316

3.  Strategy for exploiting exotic germplasm using genetic, morphological, and environmental diversity: the Aegilops tauschii Coss. example.

Authors:  H Jones; N Gosman; R Horsnell; G A Rose; L A Everest; A R Bentley; S Tha; C Uauy; A Kowalski; D Novoselovic; R Simek; B Kobiljski; A Kondic-Spika; L Brbaklic; O Mitrofanova; Y Chesnokov; D Bonnett; A Greenland
Journal:  Theor Appl Genet       Date:  2013-04-05       Impact factor: 5.699

4.  From Late Miocene to Holocene: processes of differentiation within the Telestes genus (Actinopterygii: Cyprinidae).

Authors:  Vincent Dubut; Antoine Fouquet; Adrien Voisin; Caroline Costedoat; Rémi Chappaz; André Gilles
Journal:  PLoS One       Date:  2012-03-29       Impact factor: 3.240

5.  Waxy phenotype evolution in the allotetraploid cereal broomcorn millet: mutations at the GBSSI locus in their functional and phylogenetic context.

Authors:  Harriet V Hunt; Hannah M Moots; Robert A Graybosch; Huw Jones; Mary Parker; Olga Romanova; Martin K Jones; Christopher J Howe; Kay Trafford
Journal:  Mol Biol Evol       Date:  2012-08-30       Impact factor: 16.240

6.  Genetic diversity and phylogeography of broomcorn millet (Panicum miliaceum L.) across Eurasia.

Authors:  Harriet V Hunt; Michael G Campana; Matthew C Lawes; Yong-Jin Park; Mim A Bower; Christopher J Howe; Martin K Jones
Journal:  Mol Ecol       Date:  2011-10-18       Impact factor: 6.185

7.  Evolutionary history of barley cultivation in Europe revealed by genetic analysis of extant landraces.

Authors:  Huw Jones; Peter Civáň; James Cockram; Fiona J Leigh; Lydia Mj Smith; Martin K Jones; Michael P Charles; José-Luis Molina-Cano; Wayne Powell; Glynis Jones; Terence A Brown
Journal:  BMC Evol Biol       Date:  2011-11-02       Impact factor: 3.260

8.  Tetraploid wheat landraces in the Mediterranean basin: taxonomy, evolution and genetic diversity.

Authors:  Hugo R Oliveira; Michael G Campana; Huw Jones; Harriet V Hunt; Fiona Leigh; David I Redhouse; Diane L Lister; Martin K Jones
Journal:  PLoS One       Date:  2012-05-16       Impact factor: 3.240

9.  Genetic and morphological evidence for introgression between three species of willows.

Authors:  Johan Fogelqvist; Alla V Verkhozina; Alexander I Katyshev; Pascal Pucholt; Christina Dixelius; Ann Christin Rönnberg-Wästljung; Martin Lascoux; Sofia Berlin
Journal:  BMC Evol Biol       Date:  2015-09-16       Impact factor: 3.260

10.  Spatial Scales of Genetic Structure in Free-Standing and Strangler Figs (Ficus, Moraceae) Inhabiting Neotropical Forests.

Authors:  Katrin Heer; Elisabeth K V Kalko; Larissa Albrecht; Roosevelt García-Villacorta; Felix C Staeps; Edward Allen Herre; Christopher W Dick
Journal:  PLoS One       Date:  2015-07-30       Impact factor: 3.240

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