Literature DB >> 21429118

Identification of neotropical felid faeces using RCP-PCR.

S Roques1, B Adrados, C Chavez, C Keller, W E Magnusson, F Palomares, J A Godoy.   

Abstract

Faeces similarity among sympatric felid species has generally hampered their use in distributional, demographic and dietary studies. Here, we present a new and simple approach based on a set of species-specific primers, for the unambiguous identification of faeces from sympatric neotropical felids (i.e. puma, jaguar, jaguarundi and ocelot/ margay). This method, referred to as rapid classificatory protocol-PCR (RCP-PCR), consists of a single-tube multiplex PCR yielding species-specific banding patterns on agarose gel. The method was optimized with samples of known origin (14 blood and 15 fresh faeces) and validated in faecal samples of unknown origin (n = 138), for some of which (n = 40) we also obtained species identification based on mtDNA sequencing. This approach proved reliable and provides high identification success rates from faeces. Its simplicity and cost effectiveness should facilitate its application for routine surveys of presence and abundance of these species.
© 2010 Blackwell Publishing Ltd.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21429118     DOI: 10.1111/j.1755-0998.2010.02878.x

Source DB:  PubMed          Journal:  Mol Ecol Resour        ISSN: 1755-098X            Impact factor:   7.090


  6 in total

1.  Advances in multiplex PCR: balancing primer efficiencies and improving detection success.

Authors:  Daniela Sint; Lorna Raso; Michael Traugott
Journal:  Methods Ecol Evol       Date:  2012-10       Impact factor: 7.781

2.  Reliable discrimination of 10 ungulate species using high resolution melting analysis of faecal DNA.

Authors:  Ana Ramón-Laca; Dianne Gleeson; Ivor Yockney; Michael Perry; Graham Nugent; David M Forsyth
Journal:  PLoS One       Date:  2014-03-17       Impact factor: 3.240

3.  Scraping marking behaviour of the largest Neotropical felids.

Authors:  Francisco Palomares; Noa González-Borrajo; Cuauhtémoc Chávez; Yamel Rubio; Luciano M Verdade; Rocio Monsa; Bart Harmsen; Begoña Adrados; Marina Zanin
Journal:  PeerJ       Date:  2018-06-19       Impact factor: 2.984

4.  High proportion of male faeces in jaguar populations.

Authors:  Francisco Palomares; Séverine Roques; Cuauhtémoc Chávez; Leandro Silveira; Claudia Keller; Rahel Sollmann; Denise Mello do Prado; Patricia Carignano Torres; Begoña Adrados; José Antonio Godoy; Anah Tereza de Almeida Jácomo; Natália Mundim Tôrres; Mariana Malzoni Furtado; José Vicente López-Bao
Journal:  PLoS One       Date:  2012-12-28       Impact factor: 3.240

5.  Fine-Scale Habitat Segregation between Two Ecologically Similar Top Predators.

Authors:  Francisco Palomares; Néstor Fernández; Severine Roques; Cuauhtemoc Chávez; Leandro Silveira; Claudia Keller; Begoña Adrados
Journal:  PLoS One       Date:  2016-05-17       Impact factor: 3.240

6.  Assessment of bias in morphological identification of carnivore scats confirmed with molecular scatology in north-eastern Himalayan region of Pakistan.

Authors:  Faraz Akrim; Tariq Mahmood; Tamara Max; Muhammad Sajid Nadeem; Siddiqa Qasim; Shaista Andleeb
Journal:  PeerJ       Date:  2018-07-16       Impact factor: 2.984

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.