Literature DB >> 21421553

GO-Module: functional synthesis and improved interpretation of Gene Ontology patterns.

Xinan Yang1, Jianrong Li, Younghee Lee, Yves A Lussier.   

Abstract

UNLABELLED: GO-Module is a web-accessible synthesis and visualization tool developed for end-user biologists to greatly simplify the interpretation of prioritized Gene Ontology (GO) terms. GO-Module radically reduces the complexity of raw GO results into compact biomodules in two distinct ways, by (i) constructing biomodules from significant GO terms based on hierarchical knowledge, and (ii) refining the GO terms in each biomodule to contain only true positive results. Altogether, the features (biomodules) of GO-Module outputs are better organized and on average four times smaller than the input GO terms list (P = 0.0005, n = 16). AVAILABILITY: http://lussierlab.org/GO-Module.

Mesh:

Year:  2011        PMID: 21421553      PMCID: PMC3087953          DOI: 10.1093/bioinformatics/btr142

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


  24 in total

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