Literature DB >> 21417373

Collective hydrogen bond reorganization in water studied with temperature-dependent ultrafast infrared spectroscopy.

Rebecca A Nicodemus1, S A Corcelli, J L Skinner, Andrei Tokmakoff.   

Abstract

We use temperature-dependent ultrafast infrared spectroscopy of dilute HOD in H(2)O to study the picosecond reorganization of the hydrogen bond network of liquid water. Temperature-dependent two-dimensional infrared (2D IR), pump-probe, and linear absorption measurements are self-consistently analyzed with a response function formalism that includes the effects of spectral diffusion, population lifetime, reorientational motion, and nonequilibrium heating of the local environment upon vibrational relaxation. Over the range 278-345 K, we find the time scales of spectral diffusion and reorientational relaxation decrease from approximately 2.4 to 0.7 ps and 4.6 to 1.2 ps, respectively, which corresponds to barrier heights of 3.4 and 3.7 kcal/mol, respectively. We compare the temperature dependence of the time scales to a number of measures of structural relaxation and find similar effective activation barrier heights and slightly non-Arrhenius behavior, which suggests that the reaction coordinate for the hydrogen bond rearrangement in water is collective. Frequency and orientational correlation functions computed from molecular dynamics (MD) simulations over the same temperature range support our interpretations. Finally, we find the lifetime of the OD stretch is nearly the same from 278 K to room temperature and then increases as the temperature is increased to 345 K.

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Year:  2011        PMID: 21417373     DOI: 10.1021/jp111434u

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  7 in total

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Authors:  L Gkoura; G Diamantopoulos; M Fardis; D Homouz; S Alhassan; M Beazi-Katsioti; M Karagianni; A Anastasiou; G Romanos; J Hassan; G Papavassiliou
Journal:  Biomicrofluidics       Date:  2020-06-19       Impact factor: 2.800

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Authors:  Rui Shi; Hajime Tanaka
Journal:  Proc Natl Acad Sci U S A       Date:  2020-10-15       Impact factor: 11.205

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Authors:  Yusuke Asakuma; Tomoisa Maeda; Takahiro Takai; Anita Hyde; Chi Phan; Shinya Ito; Shuji Taue
Journal:  Sci Rep       Date:  2022-07-07       Impact factor: 4.996

4.  Testing the Limitations of MD-Based Local Electric Fields Using the Vibrational Stark Effect in Solution: Penicillin G as a Test Case.

Authors:  Jacek Kozuch; Samuel H Schneider; Chu Zheng; Zhe Ji; Richard T Bradshaw; Steven G Boxer
Journal:  J Phys Chem B       Date:  2021-04-26       Impact factor: 2.991

Review 5.  Water in protein hydration and ligand recognition.

Authors:  Manuela Maurer; Chris Oostenbrink
Journal:  J Mol Recognit       Date:  2019-08-27       Impact factor: 2.891

6.  Hydrogen-bond structure dynamics in bulk water: insights from ab initio simulations with coupled cluster theory.

Authors:  Jinfeng Liu; Xiao He; John Z H Zhang; Lian-Wen Qi
Journal:  Chem Sci       Date:  2017-12-04       Impact factor: 9.825

7.  Tracking Aqueous Proton Transfer by Two-Dimensional Infrared Spectroscopy and ab Initio Molecular Dynamics Simulations.

Authors:  Rongfeng Yuan; Joseph A Napoli; Chang Yan; Ondrej Marsalek; Thomas E Markland; Michael D Fayer
Journal:  ACS Cent Sci       Date:  2019-05-23       Impact factor: 14.553

  7 in total

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