Literature DB >> 21417318

Metabolomics of microliter hemolymph samples enables an improved understanding of the combined metabolic and transcriptional responses of Daphnia magna to cadmium.

Helen C Poynton1, Nadine S Taylor, Joshua Hicks, Kimberly Colson, Sarah Chan, Candace Clark, Leona Scanlan, Alexandre V Loguinov, Chris Vulpe, Mark R Viant.   

Abstract

Omic technologies offer unprecedented opportunities to better understand mode(s)-of-toxicity and downstream secondary effects by providing a holistic view of the molecular changes underlying physiological disruption. Crustacean hemolymph represents a largely untapped biochemical resource for such toxicity studies. We sought to characterize changes in the hemolymph metabolome and whole-body transcriptome to reveal early processes leading to chronic toxicity in the indicator species, Daphnia magna, after 24-h sublethal cadmium exposure (18 μg/L, corresponding to 1/10 LC(50)). We first confirmed that metabolites can be detected and identified in small volumes (∼3-6 μL) of D. magna hemolymph using Fourier transform ion cyclotron resonance mass spectrometry and NMR spectroscopy. Subsequently, mass spectrometry based metabolomics of hemolymph identified disruption to two major classes of metabolites: amino acids and fatty acids. These findings were compared to differentially expressed genes identified by a D. magna 44k oligonucleotide microarray, which included decreased levels of digestive enzymes and increased expression of cuticle proteins and oxidative stress response genes. The combination of metabolic and transcriptional changes revealed through KEGG pathway analysis and gene ontology, respectively, enabled a more complete understanding of how cadmium disrupts nutrient uptake and metabolism, ultimately resulting in decreased energy reserves and chronic toxicity.

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Year:  2011        PMID: 21417318     DOI: 10.1021/es1037222

Source DB:  PubMed          Journal:  Environ Sci Technol        ISSN: 0013-936X            Impact factor:   9.028


  18 in total

1.  Comparative transcriptome analysis in the hepatopancreas of Helice tientsinensis exposed to the toxic metal cadmium.

Authors:  Zhengfei Wang; Dan Tang; Linxia Sun; Xueling Shi; Ruobing Liu; Huayun Guo; Boping Tang
Journal:  Genes Genomics       Date:  2018-12-07       Impact factor: 1.839

2.  A complete workflow for high-resolution spectral-stitching nanoelectrospray direct-infusion mass-spectrometry-based metabolomics and lipidomics.

Authors:  Andrew D Southam; Ralf J M Weber; Jasper Engel; Martin R Jones; Mark R Viant
Journal:  Nat Protoc       Date:  2017-01-12       Impact factor: 13.491

3.  Developmental Changes for the Hemolymph Metabolome of Silkworm (Bombyx mori L.).

Authors:  Lihong Zhou; Huihui Li; Fuhua Hao; Ning Li; Xin Liu; Guoliang Wang; Yulan Wang; Huiru Tang
Journal:  J Proteome Res       Date:  2015-04-17       Impact factor: 4.466

4.  Comparative study on toxicity of ZnO and TiO2 nanoparticles on Artemia salina: effect of pre-UV-A and visible light irradiation.

Authors:  M Bhuvaneshwari; Bhawana Sagar; Siddharth Doshi; N Chandrasekaran; Amitava Mukherjee
Journal:  Environ Sci Pollut Res Int       Date:  2016-12-30       Impact factor: 4.223

5.  Gene transcription, metabolite and lipid profiling in eco-indicator daphnia magna indicate diverse mechanisms of toxicity by legacy and emerging flame-retardants.

Authors:  Leona D Scanlan; Alexandre V Loguinov; Quincy Teng; Philipp Antczak; Kathleen P Dailey; Daniel T Nowinski; Jonah Kornbluh; Xin Xin Lin; Erica Lachenauer; Audrey Arai; Nora K Douglas; Francesco Falciani; Heather M Stapleton; Chris D Vulpe
Journal:  Environ Sci Technol       Date:  2015-06-01       Impact factor: 9.028

6.  Silver nanowire exposure results in internalization and toxicity to Daphnia magna.

Authors:  Leona D Scanlan; Robert B Reed; Alexandre V Loguinov; Philipp Antczak; Abderrahmane Tagmount; Shaul Aloni; Daniel Thomas Nowinski; Pauline Luong; Christine Tran; Nadeeka Karunaratne; Don Pham; Xin Xin Lin; Francesco Falciani; Christopher P Higgins; James F Ranville; Chris D Vulpe; Benjamin Gilbert
Journal:  ACS Nano       Date:  2013-12-05       Impact factor: 15.881

7.  Structural characterization of plasma metabolites detected via LC-electrochemical coulometric array using LC-UV fractionation, MS, and NMR.

Authors:  Susan S Bird; Diane P Sheldon; Rose M Gathungu; Paul Vouros; Roger Kautz; Wayne R Matson; Bruce S Kristal
Journal:  Anal Chem       Date:  2012-11-06       Impact factor: 6.986

Review 8.  Ecotoxicogenomic approaches for understanding molecular mechanisms of environmental chemical toxicity using aquatic invertebrate, Daphnia model organism.

Authors:  Hyo Jeong Kim; Preeyaporn Koedrith; Young Rok Seo
Journal:  Int J Mol Sci       Date:  2015-05-29       Impact factor: 5.923

9.  An integrated proteomic and metabolomic study on the chronic effects of mercury in Suaeda salsa under an environmentally relevant salinity.

Authors:  Xiaoli Liu; Huifeng Wu; Chenglong Ji; Lei Wei; Jianmin Zhao; Junbao Yu
Journal:  PLoS One       Date:  2013-05-16       Impact factor: 3.240

Review 10.  Effect-based tools for monitoring and predicting the ecotoxicological effects of chemicals in the aquatic environment.

Authors:  Richard E Connon; Juergen Geist; Inge Werner
Journal:  Sensors (Basel)       Date:  2012-09-18       Impact factor: 3.576

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