Literature DB >> 21410158

Isomer population analysis of gaseous ions from infrared multiple photon dissociation kinetics.

James S Prell1, Terrence M Chang, Jeffrey A Biles, Giel Berden, Jos Oomens, Evan R Williams.   

Abstract

Infrared multiple photon dissociation (IRMPD) kinetics measured with tunable laser radiation from a free electron laser (FEL) are used to probe the relative populations of and interconversions between energetically competitive isomers of gas-phase ions at 298 K. On-resonance IRMPD kinetics of monoisomeric benzoate anion and anilinium (protonated aniline) are measured to determine the extent of overlap of the laser beam with the precursor ion population (∼93%). IRMPD kinetics indicating different photodissociation behavior for different isomers obtained at isomer-specific resonances are used to determine relative populations of salt bridge and charge-solvated isomers for ArgGly·Na(+), Ser·Cs(+), and Arg·Na(+). These values and Gibbs free energy differences obtained from them for thermal precursor populations are compared to values reported using other, less direct population probes. Rapid interconversion of two charge-solvated isomers occurs for ArgGly·Li(+), precluding population analysis for this ion. ArgGly·Na(+), ArgGly·Li(+), and Arg·Na(+) exhibit IRMPD induction periods lasting many seconds for some isomers at the laser photon energies and power used, indicating that IRMPD relative spectral intensities are time-dependent for these ions and that the relative band intensities in IRMPD spectra measured with short irradiation times may not provide meaningful information about relative isomer populations. These results constitute the first direct probe of ion isomer populations using IRMPD kinetics obtained with a FEL and illustrate a number of caveats in interpreting IRMPD spectra measured with just a single irradiation time. These results also indicate that more complete overlap of the laser beam with the ions will be highly advantageous in future instrument designs for IRMPD kinetics and spectroscopy experiments.

Entities:  

Year:  2011        PMID: 21410158     DOI: 10.1021/jp2004166

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  9 in total

1.  Structures of a(n)* ions derived from protonated pentaglycine and pentaalanine: results from IRMPD spectroscopy and DFT calculations.

Authors:  Junfang Zhao; Justin Kai-Chi Lau; Josipa Grzetic; Udo H Verkerk; Jos Oomens; K W Michael Siu; Alan C Hopkinson
Journal:  J Am Soc Mass Spectrom       Date:  2013-09-12       Impact factor: 3.109

2.  Effects of ESI conditions on kinetic trapping of the solution-phase protonation isomer of p-aminobenzoic acid in the gas phase.

Authors:  Amanda L Patrick; Adam P Cismesia; Larry F Tesler; Nicolas C Polfer
Journal:  Int J Mass Spectrom       Date:  2016-10-07       Impact factor: 1.986

3.  Structure of Protonated Threonine Dimers in the Gas Phase: Salt-Bridged or Charge-Solvated?

Authors:  Hong Yin; Xianglei Kong
Journal:  J Am Soc Mass Spectrom       Date:  2015-06-26       Impact factor: 3.109

4.  Stabilization of Glucosyl Dioxolenium Ions by "Dual Participation" of the 2,2-Dimethyl-2-(ortho-nitrophenyl)acetyl (DMNPA) Protection Group for 1,2-cis-Glucosylation.

Authors:  Wouter A Remmerswaal; Kas J Houthuijs; Roel van de Ven; Hidde Elferink; Thomas Hansen; Giel Berden; Herman S Overkleeft; Gijsbert A van der Marel; Floris P J T Rutjes; Dmitri V Filippov; Thomas J Boltje; Jonathan Martens; Jos Oomens; Jeroen D C Codée
Journal:  J Org Chem       Date:  2022-06-24       Impact factor: 4.198

5.  Influence of N-terminal residue composition on the structure of proline-containing b2+ ions.

Authors:  Ashley C Gucinski; Julia Chamot-Rooke; Vincent Steinmetz; Árpád Somogyi; Vicki H Wysocki
Journal:  J Phys Chem A       Date:  2013-02-06       Impact factor: 2.781

6.  Proton Mobility in b₂ Ion Formation and Fragmentation Reactions of Histidine-Containing Peptides.

Authors:  Carissa R Nelson; Maha T Abutokaikah; Alex G Harrison; Benjamin J Bythell
Journal:  J Am Soc Mass Spectrom       Date:  2015-11-24       Impact factor: 3.109

7.  Structure of Proton-Bound Methionine and Tryptophan Dimers in the Gas Phase Investigated with IRMPD Spectroscopy and Quantum Chemical Calculations.

Authors:  Åke Andersson; Mathias Poline; Meena Kodambattil; Oleksii Rebrov; Estelle Loire; Philippe Maître; Vitali Zhaunerchyk
Journal:  J Phys Chem A       Date:  2020-03-11       Impact factor: 2.781

8.  Protoisomerization of Indigo and Isoindigo Dyes Confirmed by Gas-Phase Infrared Ion Spectroscopy.

Authors:  Musleh Uddin Munshi; Jonathan Martens; Giel Berden; Jos Oomens
Journal:  J Phys Chem A       Date:  2019-09-17       Impact factor: 2.781

9.  Infrared multiple photon dissociation of cesium iodide clusters doped with mono-, di- and triglycine.

Authors:  Jakob Heller; Milan Ončák; Nina K Bersenkowitsch; Christian van der Linde; Martin K Beyer
Journal:  Eur J Mass Spectrom (Chichester)       Date:  2018-10-04       Impact factor: 1.067

  9 in total

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