Literature DB >> 21409387

Helix-mediated protein--protein interactions as targets for intervention using foldamers.

Thomas A Edwards1, Andrew J Wilson.   

Abstract

Protein--protein interactions (PPIs) play a central role in virtually all biological processes and have been the focus of intense investigation from structural molecular biology to cell biology for the majority of the last two decades and, more recently, are emerging as important targets for pharmaceutical intervention. A common motif found at the interface of PPIs is the α-helix, suggesting that, in the same way as the "lock and key" model has evolved for competitive inhibition of enzymes, it should be possible to elaborate "rule-based" approaches for inhibition of helix-mediated PPIs. This review will describe the biological function and structural features of a series of representative helix-mediated PPIs and discuss approaches that are being developed to target these interactions with small molecules that employ non-natural amino acids.

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Year:  2011        PMID: 21409387     DOI: 10.1007/s00726-011-0880-8

Source DB:  PubMed          Journal:  Amino Acids        ISSN: 0939-4451            Impact factor:   3.520


  20 in total

Review 1.  Inhibition of α-helix-mediated protein-protein interactions using designed molecules.

Authors:  Valeria Azzarito; Kérya Long; Natasha S Murphy; Andrew J Wilson
Journal:  Nat Chem       Date:  2013-03       Impact factor: 24.427

2.  End-Capped α-Helices as Modulators of Protein Function.

Authors:  Andrew B Mahon; Paramjit S Arora
Journal:  Drug Discov Today Technol       Date:  2012

3.  A molecular signature in the pannexin1 intracellular loop confers channel activation by the α1 adrenoreceptor in smooth muscle cells.

Authors:  Marie Billaud; Yu-Hsin Chiu; Alexander W Lohman; Thibaud Parpaite; Joshua T Butcher; Stephanie M Mutchler; Leon J DeLalio; Mykhaylo V Artamonov; Joanna K Sandilos; Angela K Best; Avril V Somlyo; Roger J Thompson; Thu H Le; Kodi S Ravichandran; Douglas A Bayliss; Brant E Isakson
Journal:  Sci Signal       Date:  2015-02-17       Impact factor: 8.192

4.  Assessing helical protein interfaces for inhibitor design.

Authors:  Brooke N Bullock; Andrea L Jochim; Paramjit S Arora
Journal:  J Am Chem Soc       Date:  2011-08-22       Impact factor: 15.419

5.  Structural studies unravel the active conformation of apo RORγt nuclear receptor and a common inverse agonism of two diverse classes of RORγt inhibitors.

Authors:  Xiang Li; Marie Anderson; Delphine Collin; Ingo Muegge; John Wan; Debra Brennan; Stanley Kugler; Donna Terenzio; Charles Kennedy; Siqi Lin; Mark E Labadia; Brian Cook; Robert Hughes; Neil A Farrow
Journal:  J Biol Chem       Date:  2017-05-25       Impact factor: 5.157

6.  Enhancement of α-helix mimicry by an α/β-peptide foldamer via incorporation of a dense ionic side-chain array.

Authors:  Lisa M Johnson; David E Mortenson; Hyun Gi Yun; W Seth Horne; Thomas J Ketas; Min Lu; John P Moore; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2012-04-23       Impact factor: 15.419

7.  Comprehensive experimental and computational analysis of binding energy hot spots at the NF-κB essential modulator/IKKβ protein-protein interface.

Authors:  Mary S Golden; Shaun M Cote; Marianna Sayeg; Brandon S Zerbe; Elizabeth A Villar; Dmitri Beglov; Stephen L Sazinsky; Rosina M Georgiadis; Sandor Vajda; Dima Kozakov; Adrian Whitty
Journal:  J Am Chem Soc       Date:  2013-04-10       Impact factor: 15.419

8.  New Frontiers in Druggability.

Authors:  Dima Kozakov; David R Hall; Raeanne L Napoleon; Christine Yueh; Adrian Whitty; Sandor Vajda
Journal:  J Med Chem       Date:  2015-08-11       Impact factor: 7.446

9.  Structural Divergence of the Group I Intron Binding Surface in Fungal Mitochondrial Tyrosyl-tRNA Synthetases That Function in RNA Splicing.

Authors:  Lilian T Lamech; Maithili Saoji; Paul J Paukstelis; Alan M Lambowitz
Journal:  J Biol Chem       Date:  2016-04-01       Impact factor: 5.157

10.  Plucking the high hanging fruit: a systematic approach for targeting protein-protein interactions.

Authors:  Monika Raj; Brooke N Bullock; Paramjit S Arora
Journal:  Bioorg Med Chem       Date:  2012-12-04       Impact factor: 3.641

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