Literature DB >> 21400199

Genetic data of 15 autosomal STR loci: an analysis of the Araraquara population colonization (São Paulo, Brazil).

Joyce Aparecida Martins1, Raquel de Freitas Figueiredo, Cyntia Sumie Yoshizaki, Greiciane Gaburro Paneto, Regina Maria Barretto Cicarelli.   

Abstract

The genetic markers most commonly utilized to determine identity and in paternity testing are autosomal short tandem repeats (STRs); to interpret the DNA analysis, the results of a case have to be compared with a pertinent reference population. Thus, the aim of this work was to characterize the genetic profile of the population of Araraquara (São Paulo, Brazil) by analyzing 15 STR loci included in the PowerPlex(®) 16 System and to correlate these data with the migration history of the population. No deviations from the Hardy-Weinberg equilibrium were observed for any of the loci, after Bonferroni's correction. Forensic parameters exhibited high values, the most polymorphic loci being Penta E, D18S51 and FGA. An unweighted pair-group method with arithmetic mean (UPGMA) tree based on genetic distances showed that the current population of Araraquara is grouped with populations of the southeastern region of Brazil, which are close to the European group but distant from African and Amerindian populations. Estimates of admixture components revealed that the contributions to the population of Araraquara were 76% European, 18% African, and 6% Amerindian.

Entities:  

Mesh:

Year:  2011        PMID: 21400199     DOI: 10.1007/s11033-011-0693-6

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  18 in total

1.  Geography influences microsatellite polymorphism diversity in Amerindians.

Authors:  Fabiana B Kohlrausch; Sidia M Callegari-Jacques; Luiza T Tsuneto; M Luiza Petzl-Erler; Kim Hill; A Magdalena Hurtado; Francisco M Salzano; Mara H Hutz
Journal:  Am J Phys Anthropol       Date:  2005-04       Impact factor: 2.868

2.  17 STR data (AmpF/STR Identifiler and Powerplex 16 System) from Cabinda (Angola).

Authors:  S Beleza; C Alves; F Reis; A Amorim; A Carracedo; L Gusmão
Journal:  Forensic Sci Int       Date:  2004-05-10       Impact factor: 2.395

3.  Contribution for an African autosomic STR database (AmpF/STR Identifiler and Powerplex 16 System) and a report on genotypic variations.

Authors:  Cíntia Alves; Leonor Gusmão; Albertino Damasceno; Benilde Soares; António Amorim
Journal:  Forensic Sci Int       Date:  2004-01-28       Impact factor: 2.395

4.  Genetic study of 15 STRs loci of Identifiler system in Angola population.

Authors:  Miguel Manuel Melo; Mónica Carvalho; Virgínia Lopes; Maria João Anjos; Armando Serra; Duarte Nuno Vieira; Jorge Sequeiros; Francisco Corte-Real
Journal:  Forensic Sci Int Genet       Date:  2010-04-15       Impact factor: 4.882

5.  Genetic diversity and statistical parameters of 15 autosomal STR loci in the Pomeranian subpopulation of Espirito Santo State, Brazil.

Authors:  Beatriz Candida Silva; Eldamária de Vargas Wolfgramm; Vitor Resende da Costa Aguiar; Frederico Scott Varela Malta; Amanda Mafia de Castro; Alessandro Clayton de Souza Ferreira; Flavia de Paula; Iúri Drumond Louro
Journal:  Mol Biol Rep       Date:  2010-01-29       Impact factor: 2.316

6.  PopAffiliator: online calculator for individual affiliation to a major population group based on 17 autosomal short tandem repeat genotype profile.

Authors:  Luísa Pereira; Farida Alshamali; Rune Andreassen; Ruth Ballard; Wasun Chantratita; Nam Soo Cho; Clotilde Coudray; Jean-Michel Dugoujon; Marta Espinoza; Fabricio González-Andrade; Sibte Hadi; Uta-Dorothee Immel; Catalin Marian; Antonio Gonzalez-Martin; Gerhard Mertens; Walther Parson; Carlos Perone; Lourdes Prieto; Haruo Takeshita; Héctor Rangel Villalobos; Zhaoshu Zeng; Lev Zhivotovsky; Rui Camacho; Nuno A Fonseca
Journal:  Int J Legal Med       Date:  2010-06-16       Impact factor: 2.686

7.  Population data on the AmpF/STR Identifiler loci in Africans and Europeans from South Africa.

Authors:  Akira Kido; Yuji Dobashi; Noboru Fujitani; Masaaki Hara; Rie Susukida; Hiroshi Kimura; Masakazu Oya
Journal:  Forensic Sci Int       Date:  2006-03-23       Impact factor: 2.395

8.  Allelic frequencies of the 15 STR loci included in the AmpFlSTR Identifiler PCR Amplification Kit in an autochthonous sample from Spain.

Authors:  Manuel V Camacho; César Benito; Ana M Figueiras
Journal:  Forensic Sci Int       Date:  2007-03-08       Impact factor: 2.395

9.  Allele frequencies of fifteen STRs in a representative sample of the Italian population.

Authors:  F Brisighelli; C Capelli; I Boschi; P Garagnani; M V Lareu; V L Pascali; A Carracedo
Journal:  Forensic Sci Int Genet       Date:  2008-06-20       Impact factor: 4.882

10.  Allelic frequency distribution of 17 STRs from Identifiler and PowerPlex-16 in Central Portugal area and the Azores archipelago.

Authors:  Virgínia Lopes; Armando Serra; Joaquín Gamero; Lisa Sampaio; Filipa Balsa; Clara Oliveira; Luísa Batista; Francisco Corte-Real; Duarte Nuno Vieira; Maria Conceição Vide; Maria João Anjos; Mónica Carvalho
Journal:  Forensic Sci Int Genet       Date:  2009-01-19       Impact factor: 4.882

View more
  2 in total

1.  A systematic scoping review of the genetic ancestry of the Brazilian population.

Authors:  Aracele Maria de Souza; Sarah Stela Resende; Taís Nóbrega de Sousa; Cristiana Ferreira Alves de Brito
Journal:  Genet Mol Biol       Date:  2019-11-14       Impact factor: 1.771

2.  Human neutral genetic variation and forensic STR data.

Authors:  Nuno M Silva; Luísa Pereira; Estella S Poloni; Mathias Currat
Journal:  PLoS One       Date:  2012-11-21       Impact factor: 3.240

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.