Literature DB >> 21399952

Unanticipated consequences of logarithmic transformation in bivariate allometry.

Gary C Packard1.   

Abstract

Parameters in the two-parameter allometric equation are commonly estimated by fitting a straight line to logarithmic transformations of the original data and by back-transforming the resulting model to the arithmetic scale. However, log transformation distorts the relationship between the predictor and response variables, and this distortion may be sufficient to lead unsuspecting investigators to analyze data that actually are unsuited for allometric research. Two data sets from the current literature are re-examined here to illustrate instances in which log transformation caused ugly data to look deceptively good. One of the investigations focused on the scaling of metabolism to body mass in evolutionary transitions from prokaryotic to protistan to metazoan levels of organization whereas the other addressed the scaling of intestines to body size in rodents. In both instances investigators were led to conclusions that are not supported by the original data. Problems of the sort described here can readily be avoided simply by performing preliminary graphical analysis of observations expressed in the original units and by validating the final model in the arithmetic domain.

Mesh:

Year:  2011        PMID: 21399952     DOI: 10.1007/s00360-011-0565-3

Source DB:  PubMed          Journal:  J Comp Physiol B        ISSN: 0174-1578            Impact factor:   2.200


  15 in total

Review 1.  Fitting statistical models in bivariate allometry.

Authors:  Gary C Packard; Geoffrey F Birchard; Thomas J Boardman
Journal:  Biol Rev Camb Philos Soc       Date:  2010-10-05

2.  Shifts in metabolic scaling, production, and efficiency across major evolutionary transitions of life.

Authors:  John P DeLong; Jordan G Okie; Melanie E Moses; Richard M Sibly; James H Brown
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-29       Impact factor: 11.205

Review 3.  Allometric estimation of metabolic rates in animals.

Authors:  Craig R White
Journal:  Comp Biochem Physiol A Mol Integr Physiol       Date:  2010-10-16       Impact factor: 2.320

Review 4.  Bivariate line-fitting methods for allometry.

Authors:  David I Warton; Ian J Wright; Daniel S Falster; Mark Westoby
Journal:  Biol Rev Camb Philos Soc       Date:  2006-03-30

5.  Mean mass-specific metabolic rates are strikingly similar across life's major domains: Evidence for life's metabolic optimum.

Authors:  Anastassia M Makarieva; Victor G Gorshkov; Bai-Lian Li; Steven L Chown; Peter B Reich; Valery M Gavrilov
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-24       Impact factor: 11.205

6.  On the use of logarithmic transformations in allometric analyses.

Authors:  Gary C Packard
Journal:  J Theor Biol       Date:  2008-10-29       Impact factor: 2.691

7.  The use of transformations.

Authors:  M S BARTLETT
Journal:  Biometrics       Date:  1947-03       Impact factor: 2.571

8.  The allometry of rodent intestines.

Authors:  Barry G Lovegrove
Journal:  J Comp Physiol B       Date:  2010-01-09       Impact factor: 2.200

9.  A comparison of methods for fitting allometric equations to field metabolic rates of animals.

Authors:  Gary C Packard; Thomas J Boardman
Journal:  J Comp Physiol B       Date:  2008-09-17       Impact factor: 2.200

Review 10.  Allometry and size in ontogeny and phylogeny.

Authors:  S J Gould
Journal:  Biol Rev Camb Philos Soc       Date:  1966-11
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  2 in total

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Authors:  Christina J Painting; Gregory I Holwell
Journal:  PLoS One       Date:  2013-11-27       Impact factor: 3.240

2.  A framework for identifying plant species to be used as 'ecological engineers' for fixing soil on unstable slopes.

Authors:  Murielle Ghestem; Kunfang Cao; Wenzhang Ma; Nick Rowe; Raphaëlle Leclerc; Clément Gadenne; Alexia Stokes
Journal:  PLoS One       Date:  2014-08-08       Impact factor: 3.240

  2 in total

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