Literature DB >> 21398552

Genome sequence of Acinetobacter baumannii MDR-TJ.

Feng Gao1, Yue Wang, Yan-Jie Liu, Xiao-Meng Wu, Xing Lv, Yi-Ru Gan, Shi-Duo Song, He Huang.   

Abstract

Acinetobacter baumannii is a pathogenic species of bacteria, identified as an aerobic gram-negative bacterium, that is resistant to most antibiotics. In this study, the MDR-TJ strain was isolated at the Second Hospital of Tianjin Medical University, China, and was found to be resistant to penicillin, cephalosporins, aminoglycosides, quinolones, and also imipenem. The genome sequence of Acinetobacter baumannii strain MDR-TJ was determined by using a combination of 454 pyrosequencing and paired-end sequencing performed with the Roche Genome Sequencer FLX system to generate a scaffolded assembly.

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Year:  2011        PMID: 21398552      PMCID: PMC3133082          DOI: 10.1128/JB.00226-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  11 in total

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Review 2.  Global challenge of multidrug-resistant Acinetobacter baumannii.

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Review 3.  An increasing threat in hospitals: multidrug-resistant Acinetobacter baumannii.

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Journal:  Nat Rev Microbiol       Date:  2007-12       Impact factor: 60.633

4.  Nosocomial Acinetobacter baumannii infections: microbiological and clinical epidemiology.

Authors:  D Villers; E Espaze; M Coste-Burel; F Giauffret; E Ninin; F Nicolas; H Richet
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5.  GeneMark: web software for gene finding in prokaryotes, eukaryotes and viruses.

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7.  GC-Profile: a web-based tool for visualizing and analyzing the variation of GC content in genomic sequences.

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8.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

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Journal:  BMC Bioinformatics       Date:  2008-02-01       Impact factor: 3.169

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Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969

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  15 in total

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Review 2.  Antimicrobial resistance in Acinetobacter baumannii: From bench to bedside.

Authors:  Ming-Feng Lin; Chung-Yu Lan
Journal:  World J Clin Cases       Date:  2014-12-16       Impact factor: 1.337

3.  Dissemination of 16S rRNA methylase ArmA-producing acinetobacter baumannii and emergence of OXA-72 carbapenemase coproducers in Japan.

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4.  Complete genome analysis of three Acinetobacter baumannii clinical isolates in China for insight into the diversification of drug resistance elements.

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6.  Complete genome sequence of hypervirulent and outbreak-associated Acinetobacter baumannii strain LAC-4: epidemiology, resistance genetic determinants and potential virulence factors.

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7.  The induction and identification of novel Colistin resistance mutations in Acinetobacter baumannii and their implications.

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8.  The complete genome and phenome of a community-acquired Acinetobacter baumannii.

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Journal:  PLoS One       Date:  2013-03-19       Impact factor: 3.240

9.  Genome Sequences of Multidrug-Resistant Acinetobacter baumannii Strains from Nosocomial Outbreaks in Japan.

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Journal:  Genome Announc       Date:  2013-07-18

10.  A Brief Review: The Z-curve Theory and its Application in Genome Analysis.

Authors:  Ren Zhang; Chun-Ting Zhang
Journal:  Curr Genomics       Date:  2014-04       Impact factor: 2.236

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