Literature DB >> 21398503

Sphaerochaeta globosa gen. nov., sp. nov. and Sphaerochaeta pleomorpha sp. nov., free-living, spherical spirochaetes.

Kirsti M Ritalahti1,2, Shandra D Justicia-Leon3,4, Kathleen D Cusick2, Natalia Ramos-Hernandez3,4, Michael Rubin3,4, Jessica Dornbush3,4, Frank E Löffler5,1,2.   

Abstract

Free-living bacteria with spherical cells 0.5-2.5 µm in diameter were isolated from freshwater sediment. 16S rRNA gene sequence analysis placed the new isolates within the phylum Spirochaetes ('spirochaetes'). The isolates never displayed a helical morphology or motility. Growth occurred in the presence of 100 mg ampicillin l(-1) in complex and defined mineral salts medium amended with vitamins, yeast extract and monosaccharides, disaccharides or soluble starch as fermentable substrates. Two distinct isolates, designated Buddy(T) and Grapes(T), exhibited doubling times of 21±2 and 15±1 h in glucose-amended medium and grew at 15-37 and 15-30 °C. Optimum growth was observed between 25 and 30 °C and pH 6.5-7.5, with no growth below pH 5 or above pH 10. Hexose and pentose fermentation yielded ethanol, acetate and formate as major end products. Growth was strictly fermentative and anaerobic, but the isolates tolerated brief oxygen exposure. Nitrate, sulfate, thiosulfate and carbon dioxide were not used as electron acceptors, but soluble Fe(III) was reduced to Fe(II) in glucose-amended medium. The DNA G+C base contents of isolates Buddy(T) and Grapes(T) were 45.5-46.4 and 47.0-49.2 mol%, respectively. Phospholipid fatty acid (PLFA) profiles contained large proportions of C(14:0) and C(16:0) straight-chain saturated fatty acids; C(16:1)ω7c and C(16:1)ω9c dominated the mono-unsaturated PLFAs in isolate Grapes(T), whereas isolate Buddy(T) also possessed C(18:1)ω5c, C(18:1)ω7c and C(18:1)ω9c fatty acids. Branched monoenoic acids accounted for up to 12.4 and 30% of the total PLFA in isolates Grapes(T) and Buddy(T), respectively. Based on their unique morphological features and the phylogenetic distance from their closest relatives, we propose the new genus, Sphaerochaeta gen. nov., to accommodate the new isolates within the novel species Sphaerochaeta globosa sp. nov. (type strain Buddy(T) =DSM 22777(T) =ATCC BAA-1886(T)) and Sphaerochaeta pleomorpha sp. nov. (type strain Grapes(T) =DSM 22778(T) =ATCC BAA-1885(T)). Sphaerochaeta globosa is the type species of the genus.

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Year:  2011        PMID: 21398503     DOI: 10.1099/ijs.0.023986-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  20 in total

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2.  Acetogenesis from H2 plus CO2 and nitrogen fixation by an endosymbiotic spirochete of a termite-gut cellulolytic protist.

Authors:  Moriya Ohkuma; Satoko Noda; Satoshi Hattori; Toshiya Iida; Masahiro Yuki; David Starns; Jun-ichi Inoue; Alistair C Darby; Yuichi Hongoh
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-15       Impact factor: 11.205

3.  Synergistic effect from anaerobic co-digestion of food waste and Sophora flavescens residues at different co-substrate ratios.

Authors:  Xinxin Ma; Miao Yu; Min Yang; Ming Gao; Chuanfu Wu; Qunhui Wang
Journal:  Environ Sci Pollut Res Int       Date:  2019-11-19       Impact factor: 4.223

Review 4.  Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences.

Authors:  Pablo Yarza; Pelin Yilmaz; Elmar Pruesse; Frank Oliver Glöckner; Wolfgang Ludwig; Karl-Heinz Schleifer; William B Whitman; Jean Euzéby; Rudolf Amann; Ramon Rosselló-Móra
Journal:  Nat Rev Microbiol       Date:  2014-09       Impact factor: 60.633

5.  A collection of bacterial isolates from the pig intestine reveals functional and taxonomic diversity.

Authors:  David Wylensek; Thomas C A Hitch; Thomas Riedel; Afrizal Afrizal; Neeraj Kumar; Esther Wortmann; Tianzhe Liu; Saravanan Devendran; Till R Lesker; Sara B Hernández; Viktoria Heine; Eva M Buhl; Paul M D'Agostino; Fabio Cumbo; Thomas Fischöder; Marzena Wyschkon; Torey Looft; Valeria R Parreira; Birte Abt; Heidi L Doden; Lindsey Ly; João M P Alves; Markus Reichlin; Krzysztof Flisikowski; Laura Navarro Suarez; Anthony P Neumann; Garret Suen; Tomas de Wouters; Sascha Rohn; Ilias Lagkouvardos; Emma Allen-Vercoe; Cathrin Spröer; Boyke Bunk; Anja J Taverne-Thiele; Marcel Giesbers; Jerry M Wells; Klaus Neuhaus; Angelika Schnieke; Felipe Cava; Nicola Segata; Lothar Elling; Till Strowig; Jason M Ridlon; Tobias A M Gulder; Jörg Overmann; Thomas Clavel
Journal:  Nat Commun       Date:  2020-12-15       Impact factor: 14.919

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Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-26       Impact factor: 11.205

7.  Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1(T)), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus Sphaerochaeta.

Authors:  Birte Abt; Cliff Han; Carmen Scheuner; Megan Lu; Alla Lapidus; Matt Nolan; Susan Lucas; Nancy Hammon; Shweta Deshpande; Jan-Fang Cheng; Roxanne Tapia; Lynne A Goodwin; Sam Pitluck; Konstantinos Liolios; Ioanna Pagani; Natalia Ivanova; Konstantinos Mavromatis; Natalia Mikhailova; Marcel Huntemann; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Evelyne-Marie Brambilla; Manfred Rohde; Stefan Spring; Sabine Gronow; Markus Göker; Tanja Woyke; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk; John C Detter
Journal:  Stand Genomic Sci       Date:  2012-05-04

8.  New Microbes New Infections promotes modern prokaryotic taxonomy: a new section "TaxonoGenomics: new genomes of microorganisms in humans".

Authors:  Pierre-Edouard Fournier; Michel Drancourt
Journal:  New Microbes New Infect       Date:  2015-06-09

9.  Live Bacillus subtilis natto Promotes Rumen Fermentation by Modulating Rumen Microbiota In Vitro.

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Journal:  Animals (Basel)       Date:  2021-05-24       Impact factor: 2.752

10.  The chimeric genome of Sphaerochaeta: nonspiral spirochetes that break with the prevalent dogma in spirochete biology.

Authors:  A Caro-Quintero; K M Ritalahti; K D Cusick; F E Löffler; K T Konstantinidis
Journal:  mBio       Date:  2012-05-15       Impact factor: 7.867

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