Literature DB >> 21393847

Expression, purification, crystallization and preliminary X-ray analysis of the DNA-binding domain of Rhodobacter capsulatus MopB.

Alexandra Müller1, Christine Schlicker, Maria Fehringer, Bernd Masepohl, Eckhard Hofmann.   

Abstract

The LysR-type regulator MopB represses transcription of several target genes (including the nitrogen-fixation gene anfA) in Rhodobacter capsulatus at high molybdenum concentrations. In this study, the isolated DNA-binding domain of MopB (MopBHTH) was overexpressed in Escherichia coli. Purified MopBHTH bound the anfA promoter as shown by DNA mobility-shift assays, demonstrating the function of the isolated regulator domain. MopBHTH was crystallized using the sitting-drop vapour-diffusion method in the presence of 0.2 M lithium sulfate, 0.1 M phosphate/citrate pH 4.2, 20%(w/v) PEG 1000 at 291 K. The crystal belonged to space group P3(1)21 or P3(2)21, with unit-cell parameters a=b=61.84, c=139.64 Å, α=β=90, γ=120°, and diffracted to 3.3 Å resolution at a synchrotron source.

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Year:  2011        PMID: 21393847      PMCID: PMC3053167          DOI: 10.1107/S1744309110054710

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  21 in total

1.  Crystal structure of a full-length LysR-type transcriptional regulator, CbnR: unusual combination of two subunit forms and molecular bases for causing and changing DNA bend.

Authors:  Shin Muraoka; Rumi Okumura; Naoto Ogawa; Takamasa Nonaka; Kiyotaka Miyashita; Toshiya Senda
Journal:  J Mol Biol       Date:  2003-05-02       Impact factor: 5.469

Review 2.  A NAC for regulating metabolism: the nitrogen assimilation control protein (NAC) from Klebsiella pneumoniae.

Authors:  Robert A Bender
Journal:  J Bacteriol       Date:  2010-07-30       Impact factor: 3.490

Review 3.  Regulation of nodulation gene expression by NodD in rhizobia.

Authors:  H R Schlaman; R J Okker; B J Lugtenberg
Journal:  J Bacteriol       Date:  1992-08       Impact factor: 3.490

4.  A quorum sensing-associated virulence gene of Pseudomonas aeruginosa encodes a LysR-like transcription regulator with a unique self-regulatory mechanism.

Authors:  H Cao; G Krishnan; B Goumnerov; J Tsongalis; R Tompkins; L G Rahme
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-27       Impact factor: 11.205

Review 5.  Molecular biology of the LysR family of transcriptional regulators.

Authors:  M A Schell
Journal:  Annu Rev Microbiol       Date:  1993       Impact factor: 15.500

6.  Critical nucleotides in the interaction of a LysR-type regulator with its target promoter region. catBC promoter activation by CatR.

Authors:  M R Parsek; R W Ye; P Pun; A M Chakrabarty
Journal:  J Biol Chem       Date:  1994-04-15       Impact factor: 5.157

7.  The structure of full-length LysR-type transcriptional regulators. Modeling of the full-length OxyR transcription factor dimer.

Authors:  Jolanta Zaim; Andrzej M Kierzek
Journal:  Nucleic Acids Res       Date:  2003-03-01       Impact factor: 16.971

8.  The LysR-type transcriptional regulator VirR is required for expression of the virulence gene vapA of Rhodococcus equi ATCC 33701.

Authors:  Dean A Russell; Gavin A Byrne; Enda P O'Connell; Clara A Boland; Wim G Meijer
Journal:  J Bacteriol       Date:  2004-09       Impact factor: 3.490

9.  rbcR [correction of rcbR], a gene coding for a member of the LysR family of transcriptional regulators, is located upstream of the expressed set of ribulose 1,5-bisphosphate carboxylase/oxygenase genes in the photosynthetic bacterium Chromatium vinosum.

Authors:  A M Viale; H Kobayashi; T Akazawa; S Henikoff
Journal:  J Bacteriol       Date:  1991-08       Impact factor: 3.490

10.  Promoters controlling expression of the alternative nitrogenase and the molybdenum uptake system in Rhodobacter capsulatus are activated by NtrC, independent of sigma54, and repressed by molybdenum.

Authors:  M Kutsche; S Leimkühler; S Angermüller; W Klipp
Journal:  J Bacteriol       Date:  1996-04       Impact factor: 3.490

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