Literature DB >> 21393843

Proteolysis of the type III glutamine synthetase from Bacteroides fragilis causes expedient crystal-packing rearrangements.

Jason van Rooyen1, Hassan Belrhali, Valarie Abratt, B Trevor Sewell.   

Abstract

This work details the intentional modifications that led to the first structure of a type III glutamine synthetase enzyme (GSIII). This approach followed the serendipitous discovery of digestion caused by an extracellular protease from a contaminating bacterium, Pseudomonas fluorescens. The protease only cleaves the GSIII protein at a single site, leaving the oligomer intact but allowing the protein to crystallize in a different space group. This transition from space group P1 to space group C222(1) is accompanied by improved growth characteristics, more reproducible diffraction and enhanced mechanical stability. The crystallographic analyses presented here provide the structural basis of the altered molecular packing in the full-length and digested crystal forms and suggest modifications for future structural studies.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21393843      PMCID: PMC3053163          DOI: 10.1107/S1744309110053893

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  25 in total

1.  A genomic view of the human-Bacteroides thetaiotaomicron symbiosis.

Authors:  Jian Xu; Magnus K Bjursell; Jason Himrod; Su Deng; Lynn K Carmichael; Herbert C Chiang; Lora V Hooper; Jeffrey I Gordon
Journal:  Science       Date:  2003-03-28       Impact factor: 47.728

2.  UCSF Chimera--a visualization system for exploratory research and analysis.

Authors:  Eric F Pettersen; Thomas D Goddard; Conrad C Huang; Gregory S Couch; Daniel M Greenblatt; Elaine C Meng; Thomas E Ferrin
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

3.  In-gel digestion of proteins for internal sequence analysis after one- or two-dimensional gel electrophoresis.

Authors:  J Rosenfeld; J Capdevielle; J C Guillemot; P Ferrara
Journal:  Anal Biochem       Date:  1992-05-15       Impact factor: 3.365

Review 4.  A review of techniques for maximizing diffraction from a protein crystal in stilla.

Authors:  Janet Newman
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

5.  Three-dimensional structure of a type III glutamine synthetase by single-particle reconstruction.

Authors:  Jason M van Rooyen; Valerie R Abratt; B Trevor Sewell
Journal:  J Mol Biol       Date:  2006-07-05       Impact factor: 5.469

6.  Biochemical and genetic characterization of an extracellular protease from Pseudomonas fluorescens CY091.

Authors:  C H Liao; D E McCallus
Journal:  Appl Environ Microbiol       Date:  1998-03       Impact factor: 4.792

7.  Expression and purification of glutamine synthetase cloned from Bacteroides fragilis.

Authors:  J A Southern; J R Parker; D R Woods
Journal:  J Gen Microbiol       Date:  1986-10

8.  Biochemical and mutational analysis of glutamine synthetase type III from the rumen anaerobe Ruminococcus albus 8.

Authors:  Kensey R Amaya; Svetlana A Kocherginskaya; Roderick I Mackie; Isaac K O Cann
Journal:  J Bacteriol       Date:  2005-11       Impact factor: 3.490

Review 9.  The integration of macromolecular diffraction data.

Authors:  Andrew G W Leslie
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

Review 10.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.