Literature DB >> 21386385

Calculations for millions of atoms with density functional theory: linear scaling shows its potential.

D R Bowler1, T Miyazaki.   

Abstract

An overview of the CONQUEST linear scaling density functional theory (DFT) code is given, focusing particularly on the scaling behaviour on modern high-performance computing platforms. We demonstrate that essentially perfect linear scaling and weak parallel scaling (with fixed number of atoms per processor core) can be achieved, and that DFT calculations on millions of atoms are now possible.

Mesh:

Year:  2010        PMID: 21386385     DOI: 10.1088/0953-8984/22/7/074207

Source DB:  PubMed          Journal:  J Phys Condens Matter        ISSN: 0953-8984            Impact factor:   2.333


  5 in total

1.  Density-functional theory study of gramicidin A ion channel geometry and electronic properties.

Authors:  Milica Todorović; David R Bowler; Michael J Gillan; Tsuyoshi Miyazaki
Journal:  J R Soc Interface       Date:  2013-09-25       Impact factor: 4.118

2.  Quantum crystallographic charge density of urea.

Authors:  Michael E Wall
Journal:  IUCrJ       Date:  2016-06-08       Impact factor: 4.769

3.  Machine Learning Adaptive Basis Sets for Efficient Large Scale Density Functional Theory Simulation.

Authors:  Ole Schütt; Joost VandeVondele
Journal:  J Chem Theory Comput       Date:  2018-07-28       Impact factor: 6.006

Review 4.  Recent advances in QM/MM free energy calculations using reference potentials.

Authors:  Fernanda Duarte; Beat A Amrein; David Blaha-Nelson; Shina C L Kamerlin
Journal:  Biochim Biophys Acta       Date:  2014-07-16

5.  Performance analysis of electronic structure codes on HPC systems: a case study of SIESTA.

Authors:  Fabiano Corsetti
Journal:  PLoS One       Date:  2014-04-18       Impact factor: 3.240

  5 in total

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