Literature DB >> 21382766

Using Gaussian-process regression for meta-analytic neuroimaging inference based on sparse observations.

Gholamreza Salimi-Khorshidi1, Thomas E Nichols, Stephen M Smith, Mark W Woolrich.   

Abstract

The purpose of neuroimaging meta-analysis is to localize the brain regions that are activated consistently in response to a certain intervention. As a commonly used technique, current coordinate-based meta-analyses (CBMA) of neuroimaging studies utilize relatively sparse information from published studies, typically only using (x,y,z) coordinates of the activation peaks. Such CBMA methods have several limitations. First, there is no way to jointly incorporate deactivation information when available, which has been shown to result in an inaccurate statistic image when assessing a difference contrast. Second, the scale of a kernel reflecting spatial uncertainty must be set without taking the effect size (e.g., Z-stat) into account. To address these problems, we employ Gaussian-process regression (GPR), explicitly estimating the unobserved statistic image given the sparse peak activation "coordinate" and "standardized effect-size estimate" data. In particular, our model allows estimation of effect size at each voxel, something existing CBMA methods cannot produce. Our results show that GPR outperforms existing CBMA techniques and is capable of more accurately reproducing the (usually unavailable) full-image analysis results.

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Year:  2011        PMID: 21382766     DOI: 10.1109/TMI.2011.2122341

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  6 in total

Review 1.  Ten simple rules for neuroimaging meta-analysis.

Authors:  Veronika I Müller; Edna C Cieslik; Angela R Laird; Peter T Fox; Joaquim Radua; David Mataix-Cols; Christopher R Tench; Tal Yarkoni; Thomas E Nichols; Peter E Turkeltaub; Tor D Wager; Simon B Eickhoff
Journal:  Neurosci Biobehav Rev       Date:  2017-11-24       Impact factor: 8.989

Review 2.  Practical recommendations to conduct a neuroimaging meta-analysis for neuropsychiatric disorders.

Authors:  Masoud Tahmasian; Amir A Sepehry; Fateme Samea; Tina Khodadadifar; Zahra Soltaninejad; Nooshin Javaheripour; Habibolah Khazaie; Mojtaba Zarei; Simon B Eickhoff; Claudia R Eickhoff
Journal:  Hum Brain Mapp       Date:  2019-08-04       Impact factor: 5.038

3.  Functional Specialization and Flexibility in Human Association Cortex.

Authors:  B T Thomas Yeo; Fenna M Krienen; Simon B Eickhoff; Siti N Yaakub; Peter T Fox; Randy L Buckner; Christopher L Asplund; Michael W L Chee
Journal:  Cereb Cortex       Date:  2014-09-23       Impact factor: 5.357

4.  Clustering the Brain With "CluB": A New Toolbox for Quantitative Meta-Analysis of Neuroimaging Data.

Authors:  Manuela Berlingeri; Francantonio Devoto; Francesca Gasparini; Aurora Saibene; Silvia E Corchs; Lucia Clemente; Laura Danelli; Marcello Gallucci; Riccardo Borgoni; Nunzio Alberto Borghese; Eraldo Paulesu
Journal:  Front Neurosci       Date:  2019-10-22       Impact factor: 4.677

Review 5.  A meta-analysis of sex differences in human brain structure.

Authors:  Amber N V Ruigrok; Gholamreza Salimi-Khorshidi; Meng-Chuan Lai; Simon Baron-Cohen; Michael V Lombardo; Roger J Tait; John Suckling
Journal:  Neurosci Biobehav Rev       Date:  2013-12-26       Impact factor: 8.989

6.  Individualized Gaussian process-based prediction and detection of local and global gray matter abnormalities in elderly subjects.

Authors:  G Ziegler; G R Ridgway; R Dahnke; C Gaser
Journal:  Neuroimage       Date:  2014-04-15       Impact factor: 6.556

  6 in total

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