Literature DB >> 21373694

De novo designed peptides for biological applications.

Aimee L Boyle1, Derek N Woolfson.   

Abstract

In recent years our ability to design and assemble peptide-based materials and objects de novo (i.e. from first principles) has improved considerably. This brings us to a point where the resulting assemblies are quite sophisticated and amenable to engineering in new functions. Whilst such systems could be used in a variety of ways, biological applications are of particular interest because of the demand for biocompatible, readily produced systems with potential as drug-delivery agents, components of biosensors and scaffolds for 3D cell and tissue culture. This tutorial review describes the building blocks (or tectons) that are being used in peptide assembly, highlights a range of materials and objects that have been produced, notably hydrogels and virus-like particles, and introduces a number of potential applications for the designs. This journal is © The Royal Society of Chemistry 2011

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Year:  2011        PMID: 21373694     DOI: 10.1039/c0cs00152j

Source DB:  PubMed          Journal:  Chem Soc Rev        ISSN: 0306-0012            Impact factor:   54.564


  32 in total

1.  Optically pure, water-stable metallo-helical 'flexicate' assemblies with antibiotic activity.

Authors:  Suzanne E Howson; Albert Bolhuis; Viktor Brabec; Guy J Clarkson; Jaroslav Malina; Alison Rodger; Peter Scott
Journal:  Nat Chem       Date:  2011-11-27       Impact factor: 24.427

2.  Accelerating the design of biomimetic materials by integrating RNA-seq with proteomics and materials science.

Authors:  Paul A Guerette; Shawn Hoon; Yiqi Seow; Manfred Raida; Admir Masic; Fong T Wong; Vincent H B Ho; Kiat Whye Kong; Melik C Demirel; Abdon Pena-Francesch; Shahrouz Amini; Gavin Z Tay; Dawei Ding; Ali Miserez
Journal:  Nat Biotechnol       Date:  2013-09-08       Impact factor: 54.908

Review 3.  Designing degradable hydrogels for orthogonal control of cell microenvironments.

Authors:  Prathamesh M Kharkar; Kristi L Kiick; April M Kloxin
Journal:  Chem Soc Rev       Date:  2013-04-22       Impact factor: 54.564

4.  Structural plasticity of 4-α-helical bundles exemplified by the puzzle-like molecular assembly of the Rop protein.

Authors:  Maria Amprazi; Dina Kotsifaki; Mary Providaki; Evangelia G Kapetaniou; Georgios Fellas; Ioannis Kyriazidis; Javier Pérez; Michael Kokkinidis
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-14       Impact factor: 11.205

5.  High thermodynamic stability of parametrically designed helical bundles.

Authors:  Po-Ssu Huang; Gustav Oberdorfer; Chunfu Xu; David Baker; Xue Y Pei; Brent L Nannenga; Joseph M Rogers; Frank DiMaio; Tamir Gonen; Ben Luisi
Journal:  Science       Date:  2014-10-24       Impact factor: 47.728

6.  Strong contributions from vertical triads to helix-partner preferences in parallel coiled coils.

Authors:  Jay D Steinkruger; Gail J Bartlett; Derek N Woolfson; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2012-09-13       Impact factor: 15.419

7.  The d'--d--d' vertical triad is less discriminating than the a'--a--a' vertical triad in the antiparallel coiled-coil dimer motif.

Authors:  Jay D Steinkruger; Gail J Bartlett; Erik B Hadley; Lindsay Fay; Derek N Woolfson; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2012-01-31       Impact factor: 15.419

8.  PEP-SiteFinder: a tool for the blind identification of peptide binding sites on protein surfaces.

Authors:  Adrien Saladin; Julien Rey; Pierre Thévenet; Martin Zacharias; Gautier Moroy; Pierre Tufféry
Journal:  Nucleic Acids Res       Date:  2014-05-06       Impact factor: 16.971

Review 9.  Biomolecular Assemblies: Moving from Observation to Predictive Design.

Authors:  Corey J Wilson; Andreas S Bommarius; Julie A Champion; Yury O Chernoff; David G Lynn; Anant K Paravastu; Chen Liang; Ming-Chien Hsieh; Jennifer M Heemstra
Journal:  Chem Rev       Date:  2018-10-03       Impact factor: 60.622

10.  Antigen-loaded pH-sensitive hydrogel microparticles are taken up by dendritic cells with no requirement for targeting antibodies.

Authors:  Laura E Ruff; Enas A Mahmoud; Jagadis Sankaranarayanan; José M Morachis; Carol D Katayama; Maripat Corr; Stephen M Hedrick; Adah Almutairi
Journal:  Integr Biol (Camb)       Date:  2013-01       Impact factor: 2.192

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