Literature DB >> 21362492

Consequences of reproductive mode on genome evolution in fungi.

C A Whittle1, K Nygren, H Johannesson.   

Abstract

An organism's reproductive mode is believed to be a major factor driving its genome evolution. In theory, sexual inbreeding and asexuality are associated with lower effective recombination levels and smaller effective population sizes than sexual outbreeding, giving rise to reduced selection efficiency and genetic hitchhiking. This, in turn, is predicted to result in the accumulation of deleterious mutations and other genomic changes, for example the accumulation of repetitive elements. Empirical data from plants and animals supporting/refuting these theories are sparse and have yielded few conclusive results. A growing body of data from the fungal kingdom, wherein reproductive behavior varies extensively within and among taxonomic groups, has provided new insights into the role of mating systems (e.g., homothallism, heterothallism, pseudohomothallism) and asexuality, on genome evolution. Herein, we briefly review the theoretical relationships between reproductive mode and genome evolution and give examples of empirical data on the topic derived to date from plants and animals. We subsequently focus on the available data from fungi, which suggest that reproductive mode alters the rates and patterns of genome evolution in these organisms, e.g., protein evolution, mutation rate, codon usage, frequency of genome rearrangements and repetitive elements, and variation in chromosome size.
Copyright © 2011 Elsevier Inc. All rights reserved.

Mesh:

Year:  2011        PMID: 21362492     DOI: 10.1016/j.fgb.2011.02.005

Source DB:  PubMed          Journal:  Fungal Genet Biol        ISSN: 1087-1845            Impact factor:   3.495


  12 in total

1.  Sex and speciation: the paradox that non-recombining DNA promotes recombination.

Authors:  Alexander Idnurm
Journal:  Fungal Biol Rev       Date:  2011-08-12       Impact factor: 4.706

2.  Genetic basis of self-incompatibility in the lichen-forming fungus Lobaria pulmonaria and skewed frequency distribution of mating-type idiomorphs: implications for conservation.

Authors:  Garima Singh; Francesco Dal Grande; Carolina Cornejo; Imke Schmitt; Christoph Scheidegger
Journal:  PLoS One       Date:  2012-12-07       Impact factor: 3.240

3.  Recent and massive expansion of the mating-type-specific region in the smut fungus Microbotryum.

Authors:  Carrie A Whittle; Antonina Votintseva; Kate Ridout; Dmitry A Filatov
Journal:  Genetics       Date:  2015-01-07       Impact factor: 4.402

4.  Massive changes in genome architecture accompany the transition to self-fertility in the filamentous fungus Neurospora tetrasperma.

Authors:  Christopher E Ellison; Jason E Stajich; David J Jacobson; Donald O Natvig; Alla Lapidus; Brian Foster; Andrea Aerts; Robert Riley; Erika A Lindquist; Igor V Grigoriev; John W Taylor
Journal:  Genetics       Date:  2011-07-12       Impact factor: 4.562

5.  Evidence for maintenance of sex determinants but not of sexual stages in red yeasts, a group of early diverged basidiomycetes.

Authors:  Marco A Coelho; Paula Gonçalves; José P Sampaio
Journal:  BMC Evol Biol       Date:  2011-08-31       Impact factor: 3.260

6.  Gene expression differences among three Neurospora species reveal genes required for sexual reproduction in Neurospora crassa.

Authors:  Nina A Lehr; Zheng Wang; Ning Li; David A Hewitt; Francesc López-Giráldez; Frances Trail; Jeffrey P Townsend
Journal:  PLoS One       Date:  2014-10-20       Impact factor: 3.240

7.  Selfing in Haploid Plants and Efficacy of Selection: Codon Usage Bias in the Model Moss Physcomitrella patens.

Authors:  Péter Szövényi; Kristian K Ullrich; Stefan A Rensing; Daniel Lang; Nico van Gessel; Hans K Stenøien; Elena Conti; Ralf Reski
Journal:  Genome Biol Evol       Date:  2017-06-01       Impact factor: 3.416

8.  Extensive divergence between mating-type chromosomes of the anther-smut fungus.

Authors:  Michael E Hood; Elsa Petit; Tatiana Giraud
Journal:  Genetics       Date:  2012-11-12       Impact factor: 4.562

9.  An immunity-triggering effector from the Barley smut fungus Ustilago hordei resides in an Ustilaginaceae-specific cluster bearing signs of transposable element-assisted evolution.

Authors:  Shawkat Ali; John D Laurie; Rob Linning; José Antonio Cervantes-Chávez; Denis Gaudet; Guus Bakkeren
Journal:  PLoS Pathog       Date:  2014-07-03       Impact factor: 6.823

10.  Mating-Type Locus Organization and Mating-Type Chromosome Differentiation in the Bipolar Edible Button Mushroom Agaricus bisporus.

Authors:  Marie Foulongne-Oriol; Ozgur Taskent; Ursula Kües; Anton S M Sonnenberg; Arend F van Peer; Tatiana Giraud
Journal:  Genes (Basel)       Date:  2021-07-16       Impact factor: 4.096

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