Literature DB >> 21361272

Basis of a humeomics science: chemical fractionation and molecular characterization of humic biosuprastructures.

Antonio Nebbioso1, Alessandro Piccolo.   

Abstract

We propose a mild stepwise fractionation of molecular components of a humic acid (HA) suprastructure and their structural identification by advanced analytical methods. This procedure may be the basis of a "Humeomics" approach to characterize natural humic molecules and clarify their relations with ecosystems functions. Sequential fractionation included: (1) organic solvent extraction, (2) transesterification with boron trifluoride in methanol (BF(3)-CH(3)OH), (3) methanolic alkaline hydrolysis (KOH-CH(3)OH), and (4) cleavage of ether and glycosidic bonds with HI. Structural identification of initial and final material, separated organo-soluble and hydrosoluble fractions, and subfractions was conducted by GC-MS, HPSEC-ESI-MS (high-resolution, Orbitrap), and solid- and liquid-state NMR. GC-MS revealed in organosoluble unbound fractions the presence of both saturated and unsaturated, linear and branched, alkanoic, hydroxyalkanoic and alkandioic acids, n-alkanes, and n-alkanols. These components decreased progressively in fractions obtained after weak and strong ester cleavage. Unsubstituted alkanoic acids with variable chain length were ubiquitously detected in all fractions, thereby suggesting their fundamental function in the architecture of humic suprastructures. An important role in differentiating supramolecular associations should also be attributed to substituted alkanoic acids that were detected in variable amounts in different fractions. The content of aromatic acids and steroids was only noticed in the latter fractions. HPSEC-ESI-MS of initial and final solid fractions showed similar compounds, as indicated by GC-MS, whereas the hydrosoluble fraction after transesterification revealed fewer of these compounds but noticeable nitrogen-containing acids. A large amount of "cyclic" acids were identified by MS empirical formula in initial HA, and, to a lesser extent, in the final fractionation residue as well as in the hydrosoluble fraction. The predominant alkyl NMR signals in organosoluble extracts and those of CH-N, CH-O, and O-CH-O groups in hydrosoluble fraction confirmed mass spectrometry results. Homo- and heterocorrelated liquid-state NMR spectra indicated spin systems interactions varying with separated fractions. Solid-state and dipolar-dephasing NMR spectra of final residue showed predominance of sp(2) carbons, 66% of which were quaternary carbons, and a significant increase in conformational rigidity with respect to initial HA. Separated fractions accounted for 60% of initial HA weight, and losses were attributed to hydration water, liberated volatile compounds, and decarboxylation. Quantization of analytes showed that the sum of compound classes in separated fractions was greater than that for the initial HA, thereby showing that stepwise fractionation increased significantly the analytical identification of humic molecules. Our results suggest this "Humeomics" approach as a valid path for mapping humic molecular composition and assess humus origin and formation.

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Year:  2011        PMID: 21361272     DOI: 10.1021/bm101488e

Source DB:  PubMed          Journal:  Biomacromolecules        ISSN: 1525-7797            Impact factor:   6.988


  14 in total

1.  Copolymerization of 2,4-dichlorophenol with humic substances by oxidative and photo-oxidative biomimetic catalysis.

Authors:  Barbara Fontaine; Marios Drosos; Pierluigi Mazzei
Journal:  Environ Sci Pollut Res Int       Date:  2014-03-23       Impact factor: 4.223

2.  H-binding of size- and polarity-fractionated soil and lignite humic acids after removal of metal and ash components.

Authors:  Marios Drosos; Jerry A Leenheer; Apostolos Avgeropoulos; Yiannis Deligiannakis
Journal:  Environ Sci Pollut Res Int       Date:  2013-12-03       Impact factor: 4.223

3.  Antioxidant activity of humic substances via bioluminescent monitoring in vitro.

Authors:  A S Tarasova; D I Stom; N S Kudryasheva
Journal:  Environ Monit Assess       Date:  2015-02-07       Impact factor: 2.513

4.  The effects of green waste compost on soil N, P, K, and organic matter fractions in forestry soils: elemental analysis evaluation.

Authors:  Xiaojie Feng; Xiangyang Sun; Wenjie Zhou; Wei Zhang; Feiwei Che; Suyan Li
Journal:  RSC Adv       Date:  2021-09-28       Impact factor: 4.036

5.  Root-Derived Short-Chain Suberin Diacids from Rice and Rape Seed in a Paddy Soil under Rice Cultivar Treatments.

Authors:  Haishi Ji; Yuanjun Ding; Xiaoyu Liu; Lianqing Li; Dengxiao Zhang; Zichuan Li; Jingling Sun; Muhammad Siddique Lashari; Stephen Joseph; Yuanduo Meng; Yakov Kuzyakov; Genxing Pan
Journal:  PLoS One       Date:  2015-05-11       Impact factor: 3.240

6.  Structure-Property-Function Relationship in Humic Substances to Explain the Biological Activity in Plants.

Authors:  Andrés Calderín García; Luiz Gilberto Ambrosio de Souza; Marcos Gervasio Pereira; Rosane Nora Castro; José María García-Mina; Everaldo Zonta; Francy Junior Gonçalves Lisboa; Ricardo Luis Louro Berbara
Journal:  Sci Rep       Date:  2016-02-10       Impact factor: 4.379

7.  Humic Substances Contribute to Plant Iron Nutrition Acting as Chelators and Biostimulants.

Authors:  Laura Zanin; Nicola Tomasi; Stefano Cesco; Zeno Varanini; Roberto Pinton
Journal:  Front Plant Sci       Date:  2019-05-22       Impact factor: 5.753

8.  Buffet hypothesis for microbial nutrition at the rhizosphere.

Authors:  Martha G López-Guerrero; Ernesto Ormeño-Orrillo; Mónica Rosenblueth; Julio Martinez-Romero; Esperanza Martïnez-Romero
Journal:  Front Plant Sci       Date:  2013-06-14       Impact factor: 5.753

9.  Engineering soil organic matter quality: Biodiesel Co-Product (BCP) stimulates exudation of nitrogenous microbial biopolymers.

Authors:  Marc A Redmile-Gordon; Richard P Evershed; Alison Kuhl; Elena Armenise; Rodger P White; Penny R Hirsch; Keith W T Goulding; Philip C Brookes
Journal:  Geoderma       Date:  2015-12       Impact factor: 6.114

10.  Prion protein interaction with soil humic substances: environmental implications.

Authors:  Gabriele Giachin; Joanna Narkiewicz; Denis Scaini; Ai Tran Ngoc; Alja Margon; Paolo Sequi; Liviana Leita; Giuseppe Legname
Journal:  PLoS One       Date:  2014-06-17       Impact factor: 3.240

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