Literature DB >> 21357460

Ruminococcus champanellensis sp. nov., a cellulose-degrading bacterium from human gut microbiota.

Christophe Chassard1, Eve Delmas1, Céline Robert1, Paul A Lawson2, Annick Bernalier-Donadille1.   

Abstract

A strictly anaerobic, cellulolytic strain, designated 18P13(T), was isolated from a human faecal sample. Cells were Gram-positive non-motile cocci. Strain 18P13(T) was able to degrade microcrystalline cellulose but the utilization of soluble sugars was restricted to cellobiose. Acetate and succinate were the major end products of cellulose and cellobiose fermentation. 16S rRNA gene sequence analysis revealed that the isolate belonged to the genus Ruminococcus of the family Ruminococcaceae. The closest phylogenetic relative was the ruminal cellulolytic strain Ruminococcus flavefaciens ATCC 19208(T) (<95% 16S rRNA gene sequence similarity). The DNA G+C content of strain 18P13(T) was 53.05±0.7 mol%. On the basis of phylogenetic analysis, and morphological and physiological data, strain 18P13(T) can be differentiated from other members of the genus Ruminococcus with validly published names. The name Ruminococcus champanellensis sp. nov. is proposed, with 18P13(T) (=DSM 18848(T)=JCM 17042(T)) as the type strain.

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Year:  2011        PMID: 21357460     DOI: 10.1099/ijs.0.027375-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  49 in total

Review 1.  The devil lies in the details: how variations in polysaccharide fine-structure impact the physiology and evolution of gut microbes.

Authors:  Eric C Martens; Amelia G Kelly; Alexandra S Tauzin; Harry Brumer
Journal:  J Mol Biol       Date:  2014-07-12       Impact factor: 5.469

Review 2.  What's in a Name? New Bacterial Species and Changes to Taxonomic Status from 2012 through 2015.

Authors:  Erik Munson; Karen C Carroll
Journal:  J Clin Microbiol       Date:  2016-12-28       Impact factor: 5.948

3.  Tepidibaculum saccharolyticum gen. nov., sp. nov. a moderately thermophilic, anaerobic, spore-forming bacterium isolated from a terrestrial hot spring.

Authors:  G B Slobodkina; R V Baslerov; N K Kostryukova; E A Bonch-Osmolovskaya; A I Slobodkin
Journal:  Extremophiles       Date:  2018-06-18       Impact factor: 2.395

4.  A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.

Authors:  Evan M Glasgow; Elias I Kemna; Craig A Bingman; Nicole L Ing; Kai Deng; Christopher M Bianchetti; Taichi E Takasuka; Trent R Northen; Brian G Fox
Journal:  J Biol Chem       Date:  2020-10-16       Impact factor: 5.157

5.  Ruminococcus bromii is a keystone species for the degradation of resistant starch in the human colon.

Authors:  Xiaolei Ze; Sylvia H Duncan; Petra Louis; Harry J Flint
Journal:  ISME J       Date:  2012-02-16       Impact factor: 10.302

Review 6.  The Ruminococci: key symbionts of the gut ecosystem.

Authors:  Alex J La Reau; Garret Suen
Journal:  J Microbiol       Date:  2018-02-28       Impact factor: 3.422

7.  Molecular details of a starch utilization pathway in the human gut symbiont Eubacterium rectale.

Authors:  Darrell W Cockburn; Nicole I Orlovsky; Matthew H Foley; Kurt J Kwiatkowski; Constance M Bahr; Mallory Maynard; Borries Demeler; Nicole M Koropatkin
Journal:  Mol Microbiol       Date:  2014-12-19       Impact factor: 3.501

8.  Combining in Vitro and in Silico Single-Molecule Force Spectroscopy to Characterize and Tune Cellulosomal Scaffoldin Mechanics.

Authors:  Tobias Verdorfer; Rafael C Bernardi; Aylin Meinhold; Wolfgang Ott; Zaida Luthey-Schulten; Michael A Nash; Hermann E Gaub
Journal:  J Am Chem Soc       Date:  2017-11-03       Impact factor: 15.419

9.  A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.

Authors:  Evan M Glasgow; Elias I Kemna; Craig A Bingman; Nicole Ing; Kai Deng; Christopher M Bianchetti; Taichi E Takasuka; Trent R Northen; Brian G Fox
Journal:  J Biol Chem       Date:  2020-12-18       Impact factor: 5.157

10.  Comparison of the Gut Microbiota of Jeju and Thoroughbred Horses in Korea.

Authors:  Taemook Park; Jungho Yoon; Ahram Kim; Tatsuya Unno; Youngmin Yun
Journal:  Vet Sci       Date:  2021-05-11
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