Literature DB >> 21357174

Genotyping by Allele-Specific Amplification (KASPar).

Edwin Cuppen1.   

Abstract

INTRODUCTIONThis protocol describes the use of allele-specific amplification followed by fluorescence detection (KASPar) for genotyping. The method is compatible with any real-time PCR setup and has the advantage that no specifically labeled oligonucleotides are needed.

Entities:  

Year:  2007        PMID： 21357174     DOI： 10.1101/pdb.prot4841

Source DB:  PubMed          Journal:  CSH Protoc        ISSN： 1559-6095


  34 in total

1.  Chromosome engineering, mapping, and transferring of resistance to Fusarium head blight disease from Elymus tsukushiensis into wheat.

Authors:  Joey C Cainong; William W Bockus; Yigao Feng; Peidu Chen; Lili Qi; Sunish K Sehgal; Tatiana V Danilova; Dal-Hoe Koo; Bernd Friebe; Bikram S Gill
Journal:  Theor Appl Genet       Date:  2015-03-01       Impact factor: 5.699

2.  Assignment of SNP allelic configuration in polyploids using competitive allele-specific PCR: application to citrus triploid progeny.

Authors:  José Cuenca; Pablo Aleza; Luis Navarro; Patrick Ollitrault
Journal:  Ann Bot       Date:  2013-02-18       Impact factor: 4.357

3.  Inheritance in doubled-diploid clementine and comparative study with SDR unreduced gametes of diploid clementine.

Authors:  P Aleza; J Cuenca; J Juárez; L Navarro; P Ollitrault
Journal:  Plant Cell Rep       Date:  2016-04-02       Impact factor: 4.570

4.  Origin of C. latifolia and C. aurantiifolia triploid limes: the preferential disomic inheritance of doubled-diploid 'Mexican' lime is consistent with an interploid hybridization hypothesis.

Authors:  H Rouiss; F Bakry; Y Froelicher; L Navarro; P Aleza; P Ollitrault
Journal:  Ann Bot       Date:  2018-03-05       Impact factor: 4.357

5.  Use of synteny to identify candidate genes underlying QTL controlling stomatal traits in faba bean (Vicia faba L.).

Authors:  Hamid Khazaei; Donal M O'Sullivan; Mikko J Sillanpää; Frederick L Stoddard
Journal:  Theor Appl Genet       Date:  2014-09-04       Impact factor: 5.699

6.  The population genomic signature of environmental selection in the widespread insect-pollinated tree species Frangula alnus at different geographical scales.

Authors:  H De Kort; K Vandepitte; J Mergeay; K V Mijnsbrugge; O Honnay
Journal:  Heredity (Edinb)       Date:  2015-05-06       Impact factor: 3.821

7.  Phylogenetic origin of limes and lemons revealed by cytoplasmic and nuclear markers.

Authors:  Franck Curk; Frédérique Ollitrault; Andres Garcia-Lor; François Luro; Luis Navarro; Patrick Ollitrault
Journal:  Ann Bot       Date:  2016-03-04       Impact factor: 4.357

8.  A candidate gene study of capecitabine-related toxicity in colorectal cancer identifies new toxicity variants at DPYD and a putative role for ENOSF1 rather than TYMS.

Authors:  Dan Rosmarin; Claire Palles; Alistair Pagnamenta; Kulvinder Kaur; Guillermo Pita; Miguel Martin; Enric Domingo; Angela Jones; Kimberley Howarth; Luke Freeman-Mills; Elaine Johnstone; Haitao Wang; Sharon Love; Claire Scudder; Patrick Julier; Ceres Fernández-Rozadilla; Clara Ruiz-Ponte; Angel Carracedo; Sergi Castellvi-Bel; Antoni Castells; Anna Gonzalez-Neira; Jenny Taylor; Rachel Kerr; David Kerr; Ian Tomlinson
Journal:  Gut       Date:  2014-03-19       Impact factor: 23.059

9.  MAP3K7 and GSTZ1 are associated with human longevity: a two-stage case-control study using a multilocus genotyping.

Authors:  Fausta Di Cianni; Daniele Campa; Federica Tallaro; Cosmeri Rizzato; Francesco De Rango; Roberto Barale; Giuseppe Passarino; Federico Canzian; Federica Gemignani; Alberto Montesanto; Stefano Landi; Giuseppina Rose
Journal:  Age (Dordr)       Date:  2012-05-11

10.  Identification of 19 new risk loci and potential regulatory mechanisms influencing susceptibility to testicular germ cell tumor.

Authors:  Kevin Litchfield; Max Levy; Giulia Orlando; Chey Loveday; Philip J Law; Gabriele Migliorini; Amy Holroyd; Peter Broderick; Robert Karlsson; Trine B Haugen; Wenche Kristiansen; Jérémie Nsengimana; Kerry Fenwick; Ioannis Assiotis; ZSofia Kote-Jarai; Alison M Dunning; Kenneth Muir; Julian Peto; Rosalind Eeles; Douglas F Easton; Darshna Dudakia; Nick Orr; Nora Pashayan; D Timothy Bishop; Alison Reid; Robert A Huddart; Janet Shipley; Tom Grotmol; Fredrik Wiklund; Richard S Houlston; Clare Turnbull
Journal:  Nat Genet       Date:  2017-06-12       Impact factor: 38.330
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