Literature DB >> 21357104

An expedient and versatile protocol for extracting high-quality DNA from plant leaves.

C Eduardo Vallejos1.   

Abstract

INTRODUCTIONProtocols for extracting plant genomic DNA have to contend with two major challenges: preventing the oxidation of phenolic substances that can react with nucleic acids and proteins, and eliminating polysaccharides that interfere with downstream enzymatic manipulations of DNA. A protocol has been developed in which the above-mentioned substances are removed from the sample before the DNA is removed from the chromatin structure. This protocol requires only two tubes during extraction and a single precipitation step to yield high-quality DNA. DNA extracted with this method has virtually no protein or phenolic contaminants (A(260)/A(280)>1.8), is RNA-free, contains high-molecular-weight fragments according to CHEF electrophoresis, and is fully digestible by restriction enzymes. This protocol has been successfully tested with leaf samples from common bean and corn; with leaves known to be rich in phenolics (tomato and bell pepper), pectins (sweet orange, grapefruit, and peach), or both substances (Muscadine grape); and with leaves that contain latex in the sap (papaya).

Entities:  

Year:  2007        PMID: 21357104     DOI: 10.1101/pdb.prot4765

Source DB:  PubMed          Journal:  CSH Protoc        ISSN: 1559-6095


  3 in total

1.  Characterization of two recessive genes controlling resistance to all races of bacterial spot in peppers.

Authors:  C Eduardo Vallejos; Valerie Jones; Robert E Stall; Jeffrey B Jones; Gerald V Minsavage; Diana C Schultz; Rosana Rodrigues; Lisa E Olsen; Michael Mazourek
Journal:  Theor Appl Genet       Date:  2010-02-24       Impact factor: 5.699

2.  Punctuated distribution of recombination hotspots and demarcation of pericentromeric regions in Phaseolus vulgaris L.

Authors:  Mehul S Bhakta; Valerie A Jones; C Eduardo Vallejos
Journal:  PLoS One       Date:  2015-01-28       Impact factor: 3.240

3.  Heat Stress Tolerance in Rice (Oryza sativa L.): Identification of Quantitative Trait Loci and Candidate Genes for Seedling Growth Under Heat Stress.

Authors:  Newton Lwiyiso Kilasi; Jugpreet Singh; Carlos Eduardo Vallejos; Changrong Ye; S V Krishna Jagadish; Paul Kusolwa; Bala Rathinasabapathi
Journal:  Front Plant Sci       Date:  2018-11-01       Impact factor: 5.753

  3 in total

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