Literature DB >> 21356737

The Dogfish Scyliorhinus canicula: A Reference in Jawed Vertebrates.

Marion Coolen1, Arnaud Menuet, Danièle Chassoux, Claudia Compagnucci, Sébastien Henry, Laurent Lévèque, Corinne Da Silva, Frédérick Gavory, Sylvie Samain, Patrick Wincker, Claude Thermes, Yves D'Aubenton-Carafa, Isabel Rodriguez-Moldes, Gavin Naylor, Michael Depew, Pascal Sourdaine, Sylvie Mazan.   

Abstract

INTRODUCTIONDue to their large size and long generation times, chondrichthyans have been largely ignored by geneticists. However, their key phylogenetic position makes them ideal subjects to study the molecular bases of the important morphological and physiological innovations that characterize jawed vertebrates. Such analyses are crucial to understanding the origin of the complex genetic mechanisms unraveled in osteichthyans. The small spotted dogfish Scyliorhinus canicula, a representative of the largest order of extant sharks, presents a number of advantages in this context. Due to its relatively small size among sharks, its abundance, and easy maintenance, the dogfish has been an important model in comparative anatomy and physiology for more than a century. Recently, revived interest has occurred with the development of large-scale transcriptomic and genomic resources, together with the establishment of facilities allowing massive egg and embryo production. These new tools open the way to molecular analyses of the elaborate physiological and sensory systems used by sharks. They also make it possible to take advantage of unique characteristics of these species, such as organ zonation, in analyses of cell proliferation and differentiation. Finally, they offer important perspectives to evolutionary developmental biology that will provide a better understanding of the origin and diversifications of jawed vertebrates. The dogfish whole-genome sequence, which may shortly become accessible, should establish this species as an essential shark reference, complementary to other chondrichthyan models. These analyses are likely to reveal an organism of an underestimated complexity, far from the primitive prototypical gnathostome anticipated in gradistic views.

Entities:  

Year:  2008        PMID: 21356737     DOI: 10.1101/pdb.emo111

Source DB:  PubMed          Journal:  CSH Protoc        ISSN: 1559-6095


  20 in total

1.  The ancestral role of nodal signalling in breaking L/R symmetry in the vertebrate forebrain.

Authors:  Ronan Lagadec; Laurent Laguerre; Arnaud Menuet; Anis Amara; Claire Rocancourt; Pierre Péricard; Benoît G Godard; Maria Celina Rodicio; Isabel Rodriguez-Moldes; Hélène Mayeur; Quentin Rougemont; Sylvie Mazan; Agnès Boutet
Journal:  Nat Commun       Date:  2015-03-30       Impact factor: 14.919

Review 2.  Early patterning in a chondrichthyan model, the small spotted dogfish: towards the gnathostome ancestral state.

Authors:  B G Godard; S Mazan
Journal:  J Anat       Date:  2012-08-20       Impact factor: 2.610

3.  Sox2+ progenitors in sharks link taste development with the evolution of regenerative teeth from denticles.

Authors:  Kyle J Martin; Liam J Rasch; Rory L Cooper; Brian D Metscher; Zerina Johanson; Gareth J Fraser
Journal:  Proc Natl Acad Sci U S A       Date:  2016-12-07       Impact factor: 11.205

4.  Evolution of lbx spinal cord expression and function.

Authors:  José Luis Juárez-Morales; Frida Weierud; Samantha J England; Celia Demby; Nicole Santos; Ginny Grieb; Sylvie Mazan; Katharine E Lewis
Journal:  Evol Dev       Date:  2021-08-19       Impact factor: 1.930

5.  Embryonic development of glial cells and myelin in the shark, Chiloscyllium punctatum.

Authors:  Lisa Rotenstein; Anthony Milanes; Marilyn Juarez; Michelle Reyes; Maria Elena de Bellard
Journal:  Gene Expr Patterns       Date:  2009-09-04       Impact factor: 1.224

6.  Comparative genomics approach to detecting split-coding regions in a low-coverage genome: lessons from the chimaera Callorhinchus milii (Holocephali, Chondrichthyes).

Authors:  Christophe Dessimoz; Stefan Zoller; Tereza Manousaki; Huan Qiu; Axel Meyer; Shigehiro Kuraku
Journal:  Brief Bioinform       Date:  2011-06-28       Impact factor: 11.622

7.  Mechanisms of endoderm formation in a cartilaginous fish reveal ancestral and homoplastic traits in jawed vertebrates.

Authors:  Benoit G Godard; Marion Coolen; Sophie Le Panse; Aurélie Gombault; Susana Ferreiro-Galve; Laurent Laguerre; Ronan Lagadec; Patrick Wincker; Julie Poulain; Corinne Da Silva; Shigehiro Kuraku; Wilfrid Carre; Agnès Boutet; Sylvie Mazan
Journal:  Biol Open       Date:  2014-10-31       Impact factor: 2.422

Review 8.  Hox gene clusters of early vertebrates: do they serve as reliable markers for genome evolution?

Authors:  Shigehiro Kuraku
Journal:  Genomics Proteomics Bioinformatics       Date:  2011-06       Impact factor: 7.691

9.  A timeline of pharyngeal endoskeletal condensation and differentiation in the shark, Scyliorhinus canicula, and the paddlefish, Polyodon spathula.

Authors:  J A Gillis; M S Modrell; C V H Baker
Journal:  J Appl Ichthyol       Date:  2012-06-01       Impact factor: 0.892

10.  Transcriptomic analysis of the lesser spotted catshark (Scyliorhinus canicula) pancreas, liver and brain reveals molecular level conservation of vertebrate pancreas function.

Authors:  John F Mulley; Adam D Hargreaves; Matthew J Hegarty; R Scott Heller; Martin T Swain
Journal:  BMC Genomics       Date:  2014-12-06       Impact factor: 3.969

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