Literature DB >> 21356692

Gene knockdown in planarians using RNA interference.

Néstor J Oviedo1, Cindy L Nicolas, Dany S Adams, Michael Levin.   

Abstract

INTRODUCTIONThis protocol describes how to produce gene knockdown in planarians using RNA interference (RNAi). It is a standard technique to evaluate gene function during regeneration and tissue maintenance in planarians. The procedure involves microinjecting double-stranded RNA (dsRNA) synthesized in vitro. Depending on the gene target, this technique can produce robust phenotypes that can be further evaluated by diverse macroscopic or microscopic procedures.

Year:  2008        PMID: 21356692     DOI: 10.1101/pdb.prot5054

Source DB:  PubMed          Journal:  CSH Protoc        ISSN: 1559-6095


  13 in total

1.  A chemical genetics approach reveals H,K-ATPase-mediated membrane voltage is required for planarian head regeneration.

Authors:  Wendy S Beane; Junji Morokuma; Dany S Adams; Michael Levin
Journal:  Chem Biol       Date:  2011-01-28

2.  Inhibition of planar cell polarity extends neural growth during regeneration, homeostasis, and development.

Authors:  Wendy S Beane; Ai-Sun Tseng; Junji Morokuma; Joan M Lemire; Michael Levin
Journal:  Stem Cells Dev       Date:  2012-03-23       Impact factor: 3.272

3.  Bioelectric signaling regulates head and organ size during planarian regeneration.

Authors:  Wendy Scott Beane; Junji Morokuma; Joan M Lemire; Michael Levin
Journal:  Development       Date:  2013-01-15       Impact factor: 6.868

4.  Regional signals in the planarian body guide stem cell fate in the presence of genomic instability.

Authors:  T Harshani Peiris; Daniel Ramirez; Paul G Barghouth; Udokanma Ofoha; Devon Davidian; Frank Weckerle; Néstor J Oviedo
Journal:  Development       Date:  2016-03-24       Impact factor: 6.868

5.  Sirtuin-1 regulates organismal growth by altering feeding behavior and intestinal morphology in planarians.

Authors:  Benjamin Ziman; Peter Karabinis; Paul Barghouth; Néstor J Oviedo
Journal:  J Cell Sci       Date:  2020-05-27       Impact factor: 5.285

6.  A low percent ethanol method for immobilizing planarians.

Authors:  Claire G Stevenson; Wendy Scott Beane
Journal:  PLoS One       Date:  2010-12-14       Impact factor: 3.240

7.  Restoration of DNA integrity and the cell cycle by electric stimulation in planarian tissues damaged by ionizing radiation.

Authors:  Devon Davidian; Melanie LeGro; Paul G Barghouth; Salvador Rojas; Benjamin Ziman; Eli Isael Maciel; David Ardell; Ariel L Escobar; Néstor J Oviedo
Journal:  J Cell Sci       Date:  2022-05-13       Impact factor: 5.235

8.  Planarians as a model of aging to study the interaction between stem cells and senescent cells in vivo.

Authors:  Patrick M Perrigue; Joseph Najbauer; Agnieszka A Jozwiak; Jan Barciszewski; Karen S Aboody; Michael E Barish
Journal:  Pathobiol Aging Age Relat Dis       Date:  2015-12-10

9.  The Akt signaling pathway is required for tissue maintenance and regeneration in planarians.

Authors:  T Harshani Peiris; Daniel Ramirez; Paul G Barghouth; Néstor J Oviedo
Journal:  BMC Dev Biol       Date:  2016-04-11       Impact factor: 1.978

10.  Cysteine and Aspartyl Proteases Contribute to Protein Digestion in the Gut of Freshwater Planaria.

Authors:  Louise S Goupil; Sam L Ivry; Ivy Hsieh; Brian M Suzuki; Charles S Craik; Anthony J O'Donoghue; James H McKerrow
Journal:  PLoS Negl Trop Dis       Date:  2016-08-08
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