Literature DB >> 21354629

Stability of expression of reference genes in porcine peripheral blood mononuclear and dendritic cells.

Marina R Facci1, Gael Auray, Francois Meurens, Rachelle Buchanan, Jill van Kessel, Volker Gerdts.   

Abstract

Real-time quantitative PCR (RT-qPCR) is a critical tool used to evaluate changes in gene expression. The precision of this tool is reliant upon the selection of reference genes whose expression remains unaltered in culture conditions and following stimulation. Stably expressed reference genes are used to normalize data so observed changes in expression are not due to artifacts but rather reflect physiological changes. In this study, we examined the expression stability of the porcine genes glyceraldehyde 3-phosphate dehydrogenase (GAPDH), succinate dehydrogenase complex subunit A (SDHA), eukaryotic elongation factor 1 gamma-like protein (eEF1), ribosomal protein L19 (RPL19), beta-actin (ACTB) and ATP synthase mitochondrial F0 complex (ATP5G1) in peripheral blood mononuclear cells (PBMCs), monocytes, monocyte-derived dendritic cells (MoDCs), blood isolated dendritic cells (BDCs) and T cells with or without stimulation with lipolysaccharide (LPS). An M value was used as a measure of gene stability as determined using geNORM software. Recommendations for the use of reference genes include using GAPDH and B-actin in PBMCs: RPL19 and SDHA in T cells; RPL19 and B-actin in monocytes; RPL-19 and SDHA in BDCs: and RPL-19 and ATP5GA in MoDCs.
Copyright © 2011 Elsevier B.V. All rights reserved.

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Year:  2011        PMID: 21354629     DOI: 10.1016/j.vetimm.2011.01.005

Source DB:  PubMed          Journal:  Vet Immunol Immunopathol        ISSN: 0165-2427            Impact factor:   2.046


  12 in total

1.  β-Galactomannan and Saccharomyces cerevisiae var. boulardii modulate the immune response against Salmonella enterica serovar Typhimurium in porcine intestinal epithelial and dendritic cells.

Authors:  Roger Badia; M Teresa Brufau; Ana Maria Guerrero-Zamora; Rosil Lizardo; Irina Dobrescu; Raquel Martin-Venegas; Ruth Ferrer; Henri Salmon; Paz Martínez; Joaquim Brufau
Journal:  Clin Vaccine Immunol       Date:  2012-02-01

2.  Effects of different short-chain fatty acids (SCFA) on gene expression of proteins involved in barrier function in IPEC-J2.

Authors:  Roberta Saleri; Melania Andrani; Paolo Borghetti; Francesca Ravanetti; Valeria Cavalli; Luca Ferrari; Elena De Angelis; Paolo Martelli
Journal:  Porcine Health Manag       Date:  2022-05-19

3.  A simple PCR-based strategy for estimating species-specific contributions in chimeras and xenografts.

Authors:  Erin L Ealba; Richard A Schneider
Journal:  Development       Date:  2013-06-19       Impact factor: 6.868

4.  Selection of reliable reference genes for quantitative real-time PCR in human T cells and neutrophils.

Authors:  Carola Ledderose; Jens Heyn; Elisabeth Limbeck; Simone Kreth
Journal:  BMC Res Notes       Date:  2011-10-20

5.  Selection of Reference Genes for Gene Expression Studies in Porcine Whole Blood and Peripheral Blood Mononuclear Cells under Polyinosinic:Polycytidylic Acid Stimulation.

Authors:  Jiying Wang; Yanping Wang; Huaizhong Wang; Xiaojing Hao; Ying Wu; Jianfeng Guo
Journal:  Asian-Australas J Anim Sci       Date:  2014-04       Impact factor: 2.509

6.  Development and validation of a harmonized TaqMan-based triplex real-time RT-PCR protocol for the quantitative detection of normalized gene expression profiles of seven porcine cytokines.

Authors:  Anja Petrov; Martin Beer; Sandra Blome
Journal:  PLoS One       Date:  2014-09-30       Impact factor: 3.240

7.  Identification of endogenous normalizing genes for expression studies in inguinal ring tissue for scrotal hernias in pigs.

Authors:  William Raphael Lorenzetti; Adriana Mercia Guaratini Ibelli; Jane de Oliveira Peixoto; Marcos Antonio Zanella Mores; Igor Ricardo Savoldi; Kamilla Bleil do Carmo; Haniel Cedraz de Oliveira; Mônica Corrêa Ledur
Journal:  PLoS One       Date:  2018-09-20       Impact factor: 3.240

8.  Porcine neonatal blood dendritic cells, but not monocytes, are more responsive to TLRs stimulation than their adult counterparts.

Authors:  Gael Auray; Marina R Facci; Jill van Kessel; Rachelle Buchanan; Lorne A Babiuk; Volker Gerdts
Journal:  PLoS One       Date:  2013-05-08       Impact factor: 3.240

9.  Evaluation of suitable reference genes for gene expression studies in porcine PBMCs in response to LPS and LTA.

Authors:  Mehmet Ulas Cinar; Mohammad Ariful Islam; Maren Pröll; Hakan Kocamis; Ernst Tholen; Dawit Tesfaye; Christian Looft; Karl Schellander; Muhammad Jasim Uddin
Journal:  BMC Res Notes       Date:  2013-02-08

10.  A new set of reference housekeeping genes for the normalization RT-qPCR data from the intestine of piglets during weaning.

Authors:  Shujin Wang; Binxing Wang; Huan He; Aomin Sun; Chunhua Guo
Journal:  PLoS One       Date:  2018-09-26       Impact factor: 3.240

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