Literature DB >> 21353677

Application of comprehensive two-dimensional gas chromatography with time-of-flight mass spectrometry method to identify potential biomarkers of perinatal asphyxia in a non-human primate model.

Andrew C Beckstrom1, Elizabeth M Humston, Laura R Snyder, Robert E Synovec, Sandra E Juul.   

Abstract

Perinatal asphyxia is a leading cause of brain injury in infants, occurring in 2-4 per 1000 live births. The clinical response to asphyxia is variable and difficult to predict with current diagnostic tests. Reliable biomarkers are needed to help predict the timing and severity of asphyxia, as well as response to treatment. Two-dimensional gas chromatography-time-of-flight-mass spectrometry (GC×GC-TOFMS) was used herein, in conjunction with chemometric data analysis approaches for metabolomic analysis in order to identify significant metabolites affected by birth asphyxia. Blood was drawn before and after 15 or 18 min of cord occlusion in a Macaca nemestrina model of perinatal asphyxia. Postnatal samples were drawn at 5 min of age (n=20 subjects). Metabolomic profiles of asphyxiated animals were compared to four controls delivered at comparable gestational age. Fifty metabolites with the greatest change pre- to post-asphyxia were identified and quantified. The metabolic profile of post-asphyxia samples showed marked variability compared to the pre-asphyxia samples. Fifteen of the 50 metabolites showed significant elevation in response to asphyxia, ten of which remained significant upon comparison to the control animals. This metabolomic analysis confirmed lactate and creatinine as markers of asphyxia and discovered new metabolites including succinic acid and malate (intermediates in the Krebs cycle) and arachidonic acid (a brain fatty acid and inflammatory marker) as potential biomarkers. GC×GC-TOFMS coupled with chemometric data analysis are useful tools to identify acute biomarkers of brain injury. Further study is needed to correlate these metabolites with severity of disease, and response to treatment.
Copyright © 2011 Elsevier B.V. All rights reserved.

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Year:  2011        PMID: 21353677      PMCID: PMC3064854          DOI: 10.1016/j.chroma.2011.01.086

Source DB:  PubMed          Journal:  J Chromatogr A        ISSN: 0021-9673            Impact factor:   4.759


  44 in total

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2.  Challenges and developments in tandem mass spectrometry based clinical metabolomics.

Authors:  Uta Ceglarek; Alexander Leichtle; Mathias Brügel; Linda Kortz; Romy Brauer; Kristin Bresler; Joachim Thiery; Georg Martin Fiedler
Journal:  Mol Cell Endocrinol       Date:  2008-10-19       Impact factor: 4.102

3.  Multiple organ involvement in perinatal asphyxia.

Authors:  A Martín-Ancel; A García-Alix; F Gayá; F Cabañas; M Burgueros; J Quero
Journal:  J Pediatr       Date:  1995-11       Impact factor: 4.406

4.  Identification of uncommon plant metabolites based on calculation of elemental compositions using gas chromatography and quadrupole mass spectrometry.

Authors:  O Fiehn; J Kopka; R N Trethewey; L Willmitzer
Journal:  Anal Chem       Date:  2000-08-01       Impact factor: 6.986

5.  Integration of metabolomics and transcriptomics data to aid biomarker discovery in type 2 diabetes.

Authors:  Susan C Connor; Michael K Hansen; Adam Corner; Randall F Smith; Terence E Ryan
Journal:  Mol Biosyst       Date:  2010-03-23

Review 6.  Metabolomics and atherosclerosis.

Authors:  Sascha N Goonewardena; Lisa E Prevette; Ankit A Desai
Journal:  Curr Atheroscler Rep       Date:  2010-07       Impact factor: 5.113

7.  The value of a scoring system for hypoxic ischaemic encephalopathy in predicting neurodevelopmental outcome.

Authors:  C M Thompson; A S Puterman; L L Linley; F M Hann; C W van der Elst; C D Molteno; A F Malan
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8.  Evaluation of urinary S100B protein level and lactate/creatinine ratio for early diagnosis and prognostic prediction of neonatal hypoxic-ischemic encephalopathy.

Authors:  Li Liu; Chong-Xun Zheng; Shu-Feng Peng; Hong-Yan Zhou; Zu-You Su; Li He; Ting Ai
Journal:  Neonatology       Date:  2009-07-07       Impact factor: 4.035

9.  Neuron-specific enolase as a marker of the severity and outcome of hypoxic ischemic encephalopathy.

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Review 10.  Measuring the metabolome: current analytical technologies.

Authors:  Warwick B Dunn; Nigel J C Bailey; Helen E Johnson
Journal:  Analyst       Date:  2005-03-04       Impact factor: 4.616

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  24 in total

1.  Urine metabolomic profile in neonates with hypoxic-ischemic encephalopa-thy.

Authors:  K Sarafidis; N Efstathiou; O Begou; V Soubasi; E Agakidou; E Gika; G Theodoridis; V Drossou
Journal:  Hippokratia       Date:  2017 Apr-Jun       Impact factor: 0.471

2.  Focal Brain Injury Associated with a Model of Severe Hypoxic-Ischemic Encephalopathy in Nonhuman Primates.

Authors:  Ryan M McAdams; Ronald J McPherson; Raj P Kapur; Sandra E Juul
Journal:  Dev Neurosci       Date:  2017-03-25       Impact factor: 2.984

3.  Improving the quality of biomarker candidates in untargeted metabolomics via peak table-based alignment of comprehensive two-dimensional gas chromatography-mass spectrometry data.

Authors:  Heather D Bean; Jane E Hill; Jean-Marie D Dimandja
Journal:  J Chromatogr A       Date:  2015-03-07       Impact factor: 4.759

4.  The perinatal transition of the circulating metabolome in a nonhuman primate.

Authors:  Andrew C Beckstrom; Pattaraporn Tanya; Elizabeth M Humston; Laura R Snyder; Robert E Synovec; Sandra E Juul
Journal:  Pediatr Res       Date:  2012-02-15       Impact factor: 3.756

5.  Understanding neonatal hypoxic-ischemic encephalopathy with metabolomics.

Authors:  N Efstathiou; G Theodoridis; K Sarafidis
Journal:  Hippokratia       Date:  2017 Jul-Sep       Impact factor: 0.471

6.  Serial plasma metabolites following hypoxic-ischemic encephalopathy in a nonhuman primate model.

Authors:  Pattaraporn T Chun; Ronald J McPherson; Luke C Marney; Sahar Z Zangeneh; Brendon A Parsons; Ali Shojaie; Robert E Synovec; Sandra E Juul
Journal:  Dev Neurosci       Date:  2015-02-27       Impact factor: 2.984

7.  Concurrent erythropoietin and hypothermia treatment improve outcomes in a term nonhuman primate model of perinatal asphyxia.

Authors:  Christopher M Traudt; Ronald J McPherson; Larry A Bauer; Todd L Richards; Thomas M Burbacher; Ryan M McAdams; Sandra E Juul
Journal:  Dev Neurosci       Date:  2013-11-01       Impact factor: 2.984

Review 8.  Four decades of leading-edge research in the reproductive and developmental sciences: the Infant Primate Research Laboratory at the University of Washington National Primate Research Center.

Authors:  Thomas M Burbacher; Kimberly S Grant; Julie Worlein; James Ha; Eliza Curnow; Sandra Juul; Gene P Sackett
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9.  Sample preparation methodology for mouse heart metabolomics using comprehensive two-dimensional gas chromatography coupled with time-of-flight mass spectrometry.

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10.  Cytokine and chemokine responses to injury and treatment in a nonhuman primate model of hypoxic-ischemic encephalopathy treated with hypothermia and erythropoietin.

Authors:  Thomas R Wood; Phuong T Vu; Bryan A Comstock; Janessa B Law; Dennis E Mayock; Patrick J Heagerty; Thomas Burbacher; Theo K Bammler; Sandra E Juul
Journal:  J Cereb Blood Flow Metab       Date:  2021-02-07       Impact factor: 6.200

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