Literature DB >> 21350922

1H, 13C, and 15N resonance assignments for the CTD-interacting domain of Nrd1 bound to Ser5-phosphorylated CTD of RNA polymerase II.

Karel Kubíček1, Josef Pasulka, Hana Černá, Frank Löhr, Richard Štefl.   

Abstract

In this article, we report the resonance assignment of CTD-interacting domain (CID) of pre-mRNA down-regulation (Nrd)1 bound to Ser5-phosphorylated CTD (pSer5) of RNA Polymerase II. The presented assignment of backbone and side-chain resonances of the Nrd1 CID proton, carbon and nitrogen nuclei will allow studies of the structure and interaction of CID with carboxy-terminal domain (CTD) of the RNA polymerase II.

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Year:  2011        PMID： 21350922     DOI： 10.1007/s12104-011-9300-y

Source DB:  PubMed          Journal:  Biomol NMR Assign        ISSN： 1874-270X            Impact factor:   0.746


  4 in total

1.  Serine phosphorylation and proline isomerization in RNAP II CTD control recruitment of Nrd1.

Authors:  Karel Kubicek; Hana Cerna; Peter Holub; Josef Pasulka; Dominika Hrossova; Frank Loehr; Ctirad Hofr; Stepanka Vanacova; Richard Stefl
Journal:  Genes Dev       Date:  2012-08-14       Impact factor: 11.361

2.  Cooperation between intrinsically disordered and ordered regions of Spt6 regulates nucleosome and Pol II CTD binding, and nucleosome assembly.

Authors:  Aiste Kasiliauskaite; Karel Kubicek; Tomas Klumpler; Martina Zanova; David Zapletal; Eliska Koutna; Jiri Novacek; Richard Stefl
Journal:  Nucleic Acids Res       Date:  2022-06-10       Impact factor: 19.160

3.  Molecular basis for coordinating transcription termination with noncoding RNA degradation.

Authors:  Agnieszka Tudek; Odil Porrua; Tomasz Kabzinski; Michael Lidschreiber; Karel Kubicek; Andrea Fortova; François Lacroute; Stepanka Vanacova; Patrick Cramer; Richard Stefl; Domenico Libri
Journal:  Mol Cell       Date:  2014-07-24       Impact factor: 17.970

4.  The role of Ctk1 kinase in termination of small non-coding RNAs.

Authors:  Tineke L Lenstra; Agnieszka Tudek; Sandra Clauder; Zhenyu Xu; Spyridon T Pachis; Dik van Leenen; Patrick Kemmeren; Lars M Steinmetz; Domenico Libri; Frank C P Holstege
Journal:  PLoS One       Date:  2013-12-04       Impact factor: 3.240
  4 in total

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