Literature DB >> 21348635

Urine metabolomic analysis identifies potential biomarkers and pathogenic pathways in kidney cancer.

Kyoungmi Kim1, Sandra L Taylor, Sheila Ganti, Lining Guo, Michael V Osier, Robert H Weiss.   

Abstract

Kidney cancer is the seventh most common cancer in the Western world, its incidence is increasing, and it is frequently metastatic at presentation, at which stage patient survival statistics are grim. In addition, there are no useful biofluid markers for this disease, such that diagnosis is dependent on imaging techniques that are not generally used for screening. In the present study, we use metabolomics techniques to identify metabolites in kidney cancer patients' urine, which appear at different levels (when normalized to account for urine volume and concentration) from the same metabolites in nonkidney cancer patients. We found that quinolinate, 4-hydroxybenzoate, and gentisate are differentially expressed at a false discovery rate of 0.26, and these metabolites are involved in common pathways of specific amino acid and energetic metabolism, consistent with high tumor protein breakdown and utilization, and the Warburg effect. When added to four different (three kidney cancer-derived and one "normal") cell lines, several of the significantly altered metabolites, quinolinate, α-ketoglutarate, and gentisate, showed increased or unchanged cell proliferation that was cell line-dependent. Further evaluation of the global metabolomics analysis, as well as confirmation of the specific potential biomarkers using a larger sample size, will lead to new avenues of kidney cancer diagnosis and therapy.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21348635      PMCID: PMC3125558          DOI: 10.1089/omi.2010.0094

Source DB:  PubMed          Journal:  OMICS        ISSN: 1536-2310


  20 in total

1.  On the origin of cancer cells.

Authors:  O WARBURG
Journal:  Science       Date:  1956-02-24       Impact factor: 47.728

2.  Using the gene ontology for microarray data mining: a comparison of methods and application to age effects in human prefrontal cortex.

Authors:  Paul Pavlidis; Jie Qin; Victoria Arango; John J Mann; Etienne Sibille
Journal:  Neurochem Res       Date:  2004-06       Impact factor: 3.996

3.  Serum sarcosine is not a marker for prostate cancer.

Authors:  Eduard A Struys; Annemieke C Heijboer; Jeroen van Moorselaar; Cornelis Jakobs; Marinus A Blankenstein
Journal:  Ann Clin Biochem       Date:  2010-03-16       Impact factor: 2.057

4.  Gentisic acid, an aspirin metabolite, inhibits oxidation of low-density lipoprotein and the formation of cholesterol ester hydroperoxides in human plasma.

Authors:  Keiko Ashidate; Mitsunobu Kawamura; Daigo Mimura; Hisako Tohda; Shigeru Miyazaki; Tamio Teramoto; Yorihiro Yamamoto; Yukio Hirata
Journal:  Eur J Pharmacol       Date:  2005-04-15       Impact factor: 4.432

5.  Integrated, nontargeted ultrahigh performance liquid chromatography/electrospray ionization tandem mass spectrometry platform for the identification and relative quantification of the small-molecule complement of biological systems.

Authors:  Anne M Evans; Corey D DeHaven; Tom Barrett; Matt Mitchell; Eric Milgram
Journal:  Anal Chem       Date:  2009-08-15       Impact factor: 6.986

6.  Aromatic hydroxylation as a potential measure of hydroxyl-radical formation in vivo. Identification of hydroxylated derivatives of salicylate in human body fluids.

Authors:  M Grootveld; B Halliwell
Journal:  Biochem J       Date:  1986-07-15       Impact factor: 3.857

7.  Renal gluconeogenesis: effects of quinolinic acid.

Authors:  S Klahr; A C Schoolwerth
Journal:  Biochim Biophys Acta       Date:  1972-08-18

8.  Sarcosine in urine after digital rectal examination fails as a marker in prostate cancer detection and identification of aggressive tumours.

Authors:  Florian Jentzmik; Carsten Stephan; Kurt Miller; Mark Schrader; Andreas Erbersdobler; Glen Kristiansen; Michael Lein; Klaus Jung
Journal:  Eur Urol       Date:  2010-01-26       Impact factor: 20.096

9.  Simultaneous quantitative determination of alpha-ketoglutaric acid and 5-hydroxymethylfurfural in human plasma by gas chromatography-mass spectrometry.

Authors:  Bernhard M Wagner; Fabrizio Donnarumma; Reinhold Wintersteiger; Werner Windischhofer; Hans J Leis
Journal:  Anal Bioanal Chem       Date:  2010-02-14       Impact factor: 4.142

10.  Proteomic changes in renal cancer and co-ordinate demonstration of both the glycolytic and mitochondrial aspects of the Warburg effect.

Authors:  Richard D Unwin; Rachel A Craven; Patricia Harnden; Sarah Hanrahan; Nick Totty; Margaret Knowles; Ian Eardley; Peter J Selby; Rosamonde E Banks
Journal:  Proteomics       Date:  2003-08       Impact factor: 3.984

View more
  49 in total

Review 1.  Urine metabolomics for kidney cancer detection and biomarker discovery.

Authors:  Sheila Ganti; Robert H Weiss
Journal:  Urol Oncol       Date:  2011 Sep-Oct       Impact factor: 3.498

Review 2.  Today's and tomorrow's imaging and circulating biomarkers for pulmonary arterial hypertension.

Authors:  Marjorie Barrier; Jolyane Meloche; Maria Helena Jacob; Audrey Courboulin; Steeve Provencher; Sébastien Bonnet
Journal:  Cell Mol Life Sci       Date:  2012-03-25       Impact factor: 9.261

3.  Kidney tumor biomarkers revealed by simultaneous multiple matrix metabolomics analysis.

Authors:  Sheila Ganti; Sandra L Taylor; Omran Abu Aboud; Joy Yang; Christopher Evans; Michael V Osier; Danny C Alexander; Kyoungmi Kim; Robert H Weiss
Journal:  Cancer Res       Date:  2012-05-24       Impact factor: 12.701

Review 4.  Future perspectives of Chinese medical formulae: chinmedomics as an effector.

Authors:  Xijun Wang; Aihua Zhang; Hui Sun
Journal:  OMICS       Date:  2012-06-26

5.  Recognition of early and late stages of bladder cancer using metabolites and machine learning.

Authors:  Valentina L Kouznetsova; Elliot Kim; Eden L Romm; Alan Zhu; Igor F Tsigelny
Journal:  Metabolomics       Date:  2019-06-20       Impact factor: 4.290

6.  Development and Validation of High Performance Liquid Chromatographic Method for Determination of Gentisic Acid and Related Renal Cell Carcinoma Biomarkers in Urine.

Authors:  Ting-An Yen; Kaushalya Sharma Dahal; Barry Lavine; Zayed Hassan; Sanjeewa Gamagedara
Journal:  Microchem J       Date:  2017-09-28       Impact factor: 4.821

7.  Urinary acylcarnitines are altered in human kidney cancer.

Authors:  Sheila Ganti; Sandra L Taylor; Kyoungmi Kim; Charles L Hoppel; Lining Guo; Joy Yang; Christopher Evans; Robert H Weiss
Journal:  Int J Cancer       Date:  2011-09-14       Impact factor: 7.396

Review 8.  Applications of metabolomics for kidney disease research: from biomarkers to therapeutic targets.

Authors:  Hiromi I Wettersten; Robert H Weiss
Journal:  Organogenesis       Date:  2013-01-01       Impact factor: 2.500

Review 9.  Metabolomics insights into pathophysiological mechanisms of nephrology.

Authors:  Aihua Zhang; Hui Sun; Shi Qiu; Xijun Wang
Journal:  Int Urol Nephrol       Date:  2013-11-12       Impact factor: 2.370

Review 10.  Metabolism of kidney cancer: from the lab to clinical practice.

Authors:  Sunil Sudarshan; Jose A Karam; James Brugarolas; R Houston Thompson; Robert Uzzo; Brian Rini; Vitaly Margulis; Jean-Jacques Patard; Bernard Escudier; W Marston Linehan
Journal:  Eur Urol       Date:  2012-09-28       Impact factor: 20.096

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.