Literature DB >> 21347064

Using the UMLS and Simple Statistical Methods to Semantically Categorize Causes of Death on Death Certificates.

Bill Riedl1, Nhan Than, Michael Hogarth.   

Abstract

Cause of death data is an invaluable resource for shaping our understanding of population health. Mortality statistics is one of the principal sources of health information and in many countries the most reliable source of health data. 1 A quick classification process for this data can significantly improve public health efforts. Currently, cause of death data is captured in unstructured form requiring months to process. We think this process can be automated, at least partially, using simple statistical Natural Language Processing, NLP, techniques and the Unified Medical Language System, UMLS, as a vocabulary resource. A system, Medical Match Master, MMM, was built to exercise this theory. We evaluate this simple NLP approach in the classification of causes of death. This technique performed well if we engaged the use of a large biomedical vocabulary and applied certain syntactic maneuvers made possible by textual relationships within the vocabulary.

Entities:  

Mesh:

Year:  2010        PMID: 21347064      PMCID: PMC3041359     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  7 in total

1.  The Unified Medical Language System (UMLS): integrating biomedical terminology.

Authors:  Olivier Bodenreider
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

2.  JOHN GRAUNT AND HIS NATURAL AND POLITICAL OBSERVATIONS.

Authors:  D V GLASS
Journal:  Proc R Soc Lond B Biol Sci       Date:  1963-12-10

3.  The 'Bills of mortality' of Florence.

Authors:  C M Cipolla
Journal:  Popul Stud (Camb)       Date:  1978-11

4.  MediClass: A system for detecting and classifying encounter-based clinical events in any electronic medical record.

Authors:  Brian Hazlehurst; H Robert Frost; Dean F Sittig; Victor J Stevens
Journal:  J Am Med Inform Assoc       Date:  2005-05-19       Impact factor: 4.497

Review 5.  Frontiers of biomedical text mining: current progress.

Authors:  Pierre Zweigenbaum; Dina Demner-Fushman; Hong Yu; Kevin B Cohen
Journal:  Brief Bioinform       Date:  2007-10-30       Impact factor: 11.622

6.  Applying natural language processing toolkits to electronic health records - an experience report.

Authors:  Neil Barrett; Jens H Weber-Jahnke
Journal:  Stud Health Technol Inform       Date:  2009

7.  Crediting his critics' concerns: remaking John Snow's map of Broad Street cholera, 1854.

Authors:  Tom Koch; Kenneth Denike
Journal:  Soc Sci Med       Date:  2009-08-27       Impact factor: 4.634

  7 in total
  3 in total

1.  Identification of pneumonia and influenza deaths using the Death Certificate Pipeline.

Authors:  Kailah Davis; Catherine Staes; Jeff Duncan; Sean Igo; Julio C Facelli
Journal:  BMC Med Inform Decis Mak       Date:  2012-05-08       Impact factor: 2.796

2.  Enhancing timeliness of drug overdose mortality surveillance: A machine learning approach.

Authors:  Patrick J Ward; Peter J Rock; Svetla Slavova; April M Young; Terry L Bunn; Ramakanth Kavuluru
Journal:  PLoS One       Date:  2019-10-16       Impact factor: 3.240

3.  Knowledge-based best of breed approach for automated detection of clinical events based on German free text digital hospital discharge letters.

Authors:  Maximilian König; André Sander; Ilja Demuth; Daniel Diekmann; Elisabeth Steinhagen-Thiessen
Journal:  PLoS One       Date:  2019-11-27       Impact factor: 3.240

  3 in total

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