Literature DB >> 21347052

The TRITON Project: Design and Implementation of an Integrative Translational Research Information Management Platform.

Philip R O Payne1, Tara B Borlawsky, William Stephens, Matthew C Barrett, Tri Nguyen-Pham, Andrew W Greaves.   

Abstract

Multi-site consortia have become the preferred setting for team-based translational research programs. Such consortia are able to facilitate increased breadth and depth of basic science and clinical research activities, but also present numerous challenges related to data collection, analysis, storage, and exchange. The Chronic Lymphocytic Leukemia (CLL) Research Consortium (CRC), a s a prototypical instance of such a consortia, uses numerous loosely coupled web applications to address its informatics needs. Over a decade of operations have allowed the CRC to identify usability and computational limitations relative to the preceding information management architecture. In response, the CRC has launched the TRITON project, with the ultimate objective of developing an open-source, extensible, and fully integrative translational research information management platform. In this manuscript, we describe the architecture, design processes, and initial implementation of thatplatform.

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Year:  2010        PMID: 21347052      PMCID: PMC3041280     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  8 in total

1.  caGrid 1.0: an enterprise Grid infrastructure for biomedical research.

Authors:  Scott Oster; Stephen Langella; Shannon Hastings; David Ervin; Ravi Madduri; Joshua Phillips; Tahsin Kurc; Frank Siebenlist; Peter Covitz; Krishnakant Shanbhag; Ian Foster; Joel Saltz
Journal:  J Am Med Inform Assoc       Date:  2007-12-20       Impact factor: 4.497

2.  LexGrid: a framework for representing, storing, and querying biomedical terminologies from simple to sublime.

Authors:  Jyotishman Pathak; Harold R Solbrig; James D Buntrock; Thomas M Johnson; Christopher G Chute
Journal:  J Am Med Inform Assoc       Date:  2009-03-04       Impact factor: 4.497

3.  Supporting the design of translational clinical studies through the generation and verification of conceptual knowledge-anchored hypotheses.

Authors:  Philip R O Payne; Philip Richard Orrin Payne; Tara B Borlawsky; Tara Borlawsky; Alan Kwok; Andrew W Greaves; Andrew Greaves
Journal:  AMIA Annu Symp Proc       Date:  2008-11-06

4.  caGrid: design and implementation of the core architecture of the cancer biomedical informatics grid.

Authors:  Joel Saltz; Scott Oster; Shannon Hastings; Stephen Langella; Tahsin Kurc; William Sanchez; Manav Kher; Arumani Manisundaram; Krishnakant Shanbhag; Peter Covitz
Journal:  Bioinformatics       Date:  2006-06-09       Impact factor: 6.937

5.  Integrating web portlet technologies with caGrid to enable rapid application development: the CRC Patient Study Calendar.

Authors:  Philip R O Payne; Philip Richard Orrin Payne; Alan Kwok; Andrew W Greaves
Journal:  AMIA Annu Symp Proc       Date:  2008-11-06

6.  The Cancer Biomedical Informatics Grid (caBIG) Security Infrastructure.

Authors:  Stephen Langella; Scott Oster; Shannon Hastings; Frank Siebenlist; Joshua Phillips; David Ervin; Justin Permar; Tahsin Kurc; Joel Saltz
Journal:  AMIA Annu Symp Proc       Date:  2007-10-11

7.  Capillary isotachophoresis study of lipoprotein network sensitive to apolipoprotein E phenotype. 1. ApoE distribution between lipoproteins.

Authors:  Alexander D Dergunov; Anne Ponthieux; Maxim V Mel'kin; Daniel Lambert; Sophie Visvikis-Siest; Gerard Siest
Journal:  Mol Cell Biochem       Date:  2009-01-13       Impact factor: 3.396

8.  Development of an agile knowledge engineering framework in support of multi-disciplinary translational research.

Authors:  Tara B Borlawsky; Rakesh Dhaval; Shannon L Hastings; Philip R O Payne
Journal:  Summit Transl Bioinform       Date:  2009-03-01
  8 in total
  1 in total

1.  Ancillary study management systems: a review of needs.

Authors:  Elizabeth K Nelson; Britt Piehler; Adam Rauch; Sarah Ramsay; Drienna Holman; Smita Asare; Adam Asare; Mark Igra
Journal:  BMC Med Inform Decis Mak       Date:  2013-01-07       Impact factor: 2.796

  1 in total

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