Literature DB >> 21346958

Using Co-Authoring and Cross-Referencing Information for MEDLINE Indexing.

Thierry Delbecque1, Pierre Zweigenbaum.   

Abstract

Due to the large amount of new papers regularly entering the MEDLINE database, there is an ongoing effort to design tools that help indexing this new material. Here we investigate the hypothesis that past indexing information coming from referencing and authoring links can be used for this purpose. Using a JAMA-based subset of MEDLINE, we designed ranking scores which rely on this information; given a new article, the aim of these scores is to build an ordered list of MeSH terms that should be used to index this article. Evaluation measures on an independent, 1000-document data set are given. Comparison with equivalent works shows benefits in recall, F-measure and mean average precision. Moreover, cited articles and authors' past articles contribute to seven of the top ten ranking features, supporting our hypothesis. Further improvements and extensions to this work are exposed in the conclusion.

Mesh:

Year:  2010        PMID: 21346958      PMCID: PMC3041281     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  4 in total

1.  The NLM Indexing Initiative.

Authors:  A R Aronson; O Bodenreider; H F Chang; S M Humphrey; J G Mork; S J Nelson; T C Rindflesch; W J Wilbur
Journal:  Proc AMIA Symp       Date:  2000

2.  Effective mapping of biomedical text to the UMLS Metathesaurus: the MetaMap program.

Authors:  A R Aronson
Journal:  Proc AMIA Symp       Date:  2001

3.  The Unified Medical Language System (UMLS): integrating biomedical terminology.

Authors:  Olivier Bodenreider
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

4.  The NLM Indexing Initiative's Medical Text Indexer.

Authors:  Alan R Aronson; James G Mork; Clifford W Gay; Susanne M Humphrey; Willie J Rogers
Journal:  Stud Health Technol Inform       Date:  2004
  4 in total
  5 in total

1.  Recommending MeSH terms for annotating biomedical articles.

Authors:  Minlie Huang; Aurélie Névéol; Zhiyong Lu
Journal:  J Am Med Inform Assoc       Date:  2011-05-25       Impact factor: 4.497

2.  USI: a fast and accurate approach for conceptual document annotation.

Authors:  Nicolas Fiorini; Sylvie Ranwez; Jacky Montmain; Vincent Ranwez
Journal:  BMC Bioinformatics       Date:  2015-03-14       Impact factor: 3.169

3.  MeSH Now: automatic MeSH indexing at PubMed scale via learning to rank.

Authors:  Yuqing Mao; Zhiyong Lu
Journal:  J Biomed Semantics       Date:  2017-04-17

4.  Biomedical articles share annotations with their citation neighbors.

Authors:  Raul Rodriguez-Esteban
Journal:  BMC Bioinformatics       Date:  2021-02-26       Impact factor: 3.169

5.  Using cited references to improve the retrieval of related biomedical documents.

Authors:  Francisco M Ortuño; Ignacio Rojas; Miguel A Andrade-Navarro; Jean-Fred Fontaine
Journal:  BMC Bioinformatics       Date:  2013-03-27       Impact factor: 3.169

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.