Literature DB >> 21346691

Dihydroberkleasmin A: a new eremophilane sesquiterpenoid from the fermentation broth of the plant endophytic fungus Pestalotiopsis photiniae.

Xiao-Long Yang1, Su Zhang, Hua-Jie Zhu, Du-Qiang Luo.   

Abstract

Dihydroberkleasmin A (1), a new ester-substituted sesquiterpenoid related to the eremophilane class, together with the known compound berkleasmin C (2), were isolated from the fermentation broth of the plant endophytic fungus Pestalotiopsis photiniae. The structure of dihydroberkleasmin A (1) was elucidated by extensive spectroscopic analysis. The stereochemistry was assigned by comparison of the NMR spectroscopic data with those of berkleasmin A.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21346691      PMCID: PMC6259671          DOI: 10.3390/molecules16021910

Source DB:  PubMed          Journal:  Molecules        ISSN: 1420-3049            Impact factor:   4.411


1. Introduction

Fungi of the genus Pestalotiopsis (Amphisphaeriaceae), as one class of the most widely distributed endophytic fungi, are common in their distribution, and many are saprobes, while others are either pathogenic or endophytic to living plants [1,2,3,4]. Since discovery of the anticancer agent taxol from an endophytic fungal strain of the genus Pestalotiopsis [5,6], interest in searching for bioactive compounds from this fungal genus has increased considerably. Up to date, about 300 species of the genus Pestalotiopsis have been recorded in China, but only about 10% of these species referred to chemical investigations. Previous chemical studies of some species of this genus have afforded a variety of bioactive metabolites [7,8,9,10,11,12,13,14,15,16,17,18]. In the course of our research on bioactive metabolites of the genus Pestalotiopsis in China, the present study was undertaken to investigate the chemical constituents of the culture broth of Pestalotiopsis photiniae isolated from the branch of Podocarpus macrophyllus in Hainan (People’s Republic of China), and have led to the isolation of a new eremophilane sesquiterpenoid named dihydroberkleasmin A (1) and one known compound, berkleasmin C (2). Details of the isolation and structural elucidation of 1 are reported herein. The structures of compounds 1, 2 and berkleasmin A.

2. Results and Discussion

Compound 1 was obtained as an optically active white powder, [α]D22.0 = +70° (c = 0.1, MeOH) that gave a quasi-molecular ion peak at [M+Na]+ m/z 545.3458 in the HR-ESI-MS (positive mode), consistent with a molecular formula of C30H50O7 (calcd. for C30H50O7Na, 545.3454), requiring six degrees of unsaturation. The IR spectrum revealed absorption bands of double bond (1,604 cm−1), hydroxyl (3,424 cm−1) and carbonyl (1,736 cm−1) groups. There were 30 signals observed in the 13C-NMR spectrum (Table 1). Analysis of the 13C-NMR, DEPT, and HSQC spectra revealed that 1 contained one carbonyl carbon, seven oxygenated carbons, two olefinic carbons, eight methylene carbons, five methine carbons, one quaternary carbon, and six methyl carbons. Analysis of the 1H-NMR spectrum (Table 1) indicated the presence of six methyl signals including one tertiary methyl [δ 1.62 (s), 1.15 (s), 1.13 (d, J = 7.2 Hz), 1.05 (d, J = 6.6 Hz), 0.89 (d, J = 6.7 Hz), 0.87 (t, J = 7.2 Hz)], one olefinic proton signal [δ 5.23 (d, J = 10.1 Hz)], two oxygenated methylene protons signals [δ 3.95, 3.54 (m), 3.63, 3.34 (m)] and three oxygenated methine proton signals [δ 4.50 (m), 4.09 (d, J = 7.4 Hz ), 3.27 (s)]. By careful analysis of NMR data, we found that the spectral data of 1 were similar to those of berkleasmin A recently reported from the saprobic fungus Berkleasmium nigroapicale [19], and this suggested that 1 has a tricyclic sesquiterpene core attached to a long-chain acid through an ester linkage. The distinct differences between 1 and berkleasmin A are: the chemical shifts value at C-11 and C-13 of 1 [δ 42.7 (d, C-11), 16.0 (q, C-13)] are absent in berkleasmin A [δ 151.2 (s, C-11), 104.3 (t, C-13)]. In addition, the chemical shifts value at C-7 (δ 48.3) and C-12 (δ 72.3) in 1 were shifted downfield compared to berkleasmin A [δ 44.6 (s, C-7), 69.9 (t, C-12)] because of replacement of the exomethylene group in berkleasmin A by a methyl group in compound 1.
Table 1

1H-(600 MHz) and 13C-NMR (150 MHz) data for 1 in CDCl3, and the literature data for berkleasmin A [19].

No. δH δC No. δH δC
14.50 (m)74.8 (d)1' 175.3 (s)
21.86, 1.77 (m)28.5 (t)2'2.71 (dq, 7.3, 7.4)42.6 (d)
31.44, 1.76 (m)25.7(t)3'4.09 (d, 7.4)79.1 (d)
41.58 (m)38.9 (d)4' 137.5 (s)
5 36.2 (s)5'5.23 (d, 10.1)130.8 (d)
6α 1.30 (t, 13.0)β 1.64 (dd, 13.0, 6.8 )37.2 (t)6'2.56 (m)40.8 (d)
71.70 (m)48.3 (d)7'1.09, 1.29 (m)31.3 (t)
8 102.3 (s)8'1.21–1.28 (m)27.2 (t)
93.27 (s)62.4 (d)9'1.21–1.28 (m)29.4 (t)
10 62.8 (s)10'1.21–1.28 (m)31.8 (t)
111.80 (m)42.7 (d)11'1.21–1.28 (m)22.6 (t)
123.54, 3.95 (m)72.3 (t)12'0.87 (t, 7.2)14.1 (q)
131.05 (d, 6.6)16.0 (q)13'1.13 (d, 7.2)15.0 (q)
141.15 (s)15.3 (q)14'1.62 (s)12.2 (q)
150.89 (d,6.7)15.1 (q)15'3.34, 3.63 (m)66.5 (t)

Further interpretation of the HMBC spectrum showed the following long-range correlations (Figure 2): from H-2' to C-1', C-3', C-4' and C-13', from H-3' to C-1', C-2', C-4', C-5', C-13' and C-14', from H-5' to C-3', C-14' and C-15', from H-6' to C-4', C-5', C-7' and C-15', from H3-13' to C-1', C-2' and C-3', from H-14' to C-3', C-4' and C-5', from H-15' to C-5' and C-7'.

1H-(600 MHz) and 13C-NMR (150 MHz) data for 1 in CDCl3, and the literature data for berkleasmin A [19]. Further interpretation of the HMBC spectrum showed the following long-range correlations (Figure 2): from H-2' to C-1', C-3', C-4' and C-13', from H-3' to C-1', C-2', C-4', C-5', C-13' and C-14', from H-5' to C-3', C-14' and C-15', from H-6' to C-4', C-5', C-7' and C-15', from H3-13' to C-1', C-2' and C-3', from H-14' to C-3', C-4' and C-5', from H-15' to C-5' and C-7'.
Figure 2

The fragments and selected HMBC correlations of 1.

The fragments and selected HMBC correlations of 1. The above spectral evidence, along with the proton spin system: H-3'/H-2' and H-2'/H3-13'; H-5'/H-6'/H-7'/H-8'/H-9'/H-10'/H-11'/H3-12' and H-6'/H-15' deduced from 1H, 1H-COSY (Figure 3) correlations, led to the establishment of the partial structure 1a (Figure 2). In addition, HMBC spectrum also showed the long-range couplings from H-1 to C-1', C-3 and C-10, from H-7 to C-6, C-8, C-9 and C-11, from H-9 to C-1, C-7, C-8 and C-10, from H-11 to C-6, C-7 and C-12, from H-12 to C-7, C-8, C-11 and C-13, from H3-13 to C-7, C-11 and C-12, from H3-14 to C-4, C-5, C-6 and C-10, from H3-15 to C-3, C-4 and C-5. These spectral data, coupling with the following correlations: H-1/H-2/H-3/H-4/H3-15; H-12/H-11/H-7/H-6 and H-11/H3-13 established by 1H,1H-COSY correlations (Figure 3), gave rise to another partial structure 1b (Figure 2). The ester bond linkage, C-1'-O-C-1, between fragments 1a and 1b was clearly determined by the HMBC correlation of H-1 with C-1', which permitted the construction of the planar structure of 1 as shown in Figure 2.
Figure 3

The 1H, 1H-COSY and key selected NOESY correlations of 1.

The 1H, 1H-COSY and key selected NOESY correlations of 1. The relative configuration of 1 was elucidated by analysis of the partial NOESY data and comparison chemical shifts with berkleasmins A-E and cryptosphaerolide [19,20]. The same relative stereochemistry of C-1, C-4, C-5, C-8, C-9, C-10, C-2', C-3' and C-4' in 1 as in berkleasmins A-E were deduced from the very similar carbon and proton chemical shifts. The β-oriented configuration of H-7 and H3-15 was indicated by the observation of NOE interactions (Figure 3) between H-6β (δ 1.64 (dd, 13.0, 6.8)) and H-7, and H-6α and H-4, respectively. The relative configuration of H3-13 and H3-14 should both also be β-oriented deduced from the observation of NOE interactions between H-7 and H3-13, and H-6β and H3-14, respectively. The E-configuration of trisubstituted olefin was assigned by NOESY correlations from H-3' to H-5', and from H-6' to H-14'. Because of some significant signal overlap, we tried to crystallize of 1 in different solvents but finally failed to obtain crystals. Due to small quantity sample, we can not further determine the relative configuration of 1 by chemical methods. Finally, the relative configuration of remaining chiral centers of 1 except for C-6' were determined by comparison chemical shifts with berkleasmins A-E. Unfortunately, the relative configuration of C-6' remains unsigned through only spectroscopic analysis. Through comparison the NMR data of 1 with that of berkleasmin A, the absolute configurations of C-1, C-8, C-2', and C-3' in 1 as berkleasmin A were determined to be 1R, 8S, 2'R, 3'S. Comparison of the physicochemical properties and optical rotation data ([α]D26 = +10° (c = 0.1, CHCl3)) with reported data allowed identifying the compound2 as berkleasmin C [19], recently reported from the saprobic fungus Berkleasmium nigroapicale and shown to possess cytotoxicity against anti-cancer cell-lines (NCI-H187, MCF-7, and KB) and antimalarial activities. The relative and absolute configurations of 2 were from literature [19].

3. Experimental

3.1. General

Optical rotations: Perkin-Elmer 341 spectropolarimeter. IR spectra: Perkin-Elmer 577 spectrometer; KBr pellets; in cm-1. NMR spectra: Bruker AM-600 spectrometer; δ in ppm, J in Hz; Me4Si as internal standard, measured in CDCl3. FT-MS spectra: Bruker Apex-Ultra 7.0 T spectrometer, in m/z. Column chromatography (CC): silica gel (200~300 mesh, Yantai Zhi Fu chemical Co., Ltd., People’s Republic of China), RP-18 (12 nm, S-50 um, YMC Co., Ltd., Japan), TLC: silica gel GF254 plates (Yantai Zhi Fu chemical Co., Ltd, People’s Republic of China) and Sephadex LH-20 gel (25~100 μm, GE Healthcare Co., Ltd., Sweden).

3.2. Fungal Material and Cultivation Conditions

Pestalotiopsis photiniae was isolated from the branches of Podocarpus macrophyllus in Hainan, People’s Republic of China, in April, 2008, and identified by Professor Jing-Ze Zhang, Institute of Biotechnology, Zhejiang University. The isolate was assigned the accession number L328 in the culture collection at College of Life Science, Key Laboratory of Medicinal Chemistry and Molecular Diagnosis of Ministry of Education, Hebei University. The fungal strain was cultured on slants of potato dextrose agar (CPDA ) at 28 °C for 7 days, and then inoculated into a 500 mL Erlenmeyer flask containing 100 mL of medium (glucose 20 g, potato (peeled) 200 g, KH2PO4 3 g, MgSO4 1.5 g, citric acid 0.1 g, and thiamin hydrochloride 10 mg in 1.0 liter deionized H2O). The final pH of the media was adjusted to 6.5 before sterilization. After 7 days of incubation at 28 °C on rotary shakers at 150 rpm, 25 mL of culture liquid were transferred as seed into each 1,000 mL Erlenmeyer flask containing 250 mL of medium and static fermentation was carried out on a rotary shaker for 30 days.

3.3. Extraction and Isolation

The culture broth (20 L) was extracted three times with ethyl acetate. Evaporation of the solvent in vacuo gave a brown oily residue (18.0 g), which was subjected to column chromatography (silica gel), eluted with petroleum ether/acetone [100:0, 98:2, 95:5, 90:10, 80:20, 50:50 (v/v)] to afford six fractions Fr. 1-6. Fr. 5 (3.0 g) eluted with petroleum ether/acetone (80:20) was further purified by CC (silica gel; CHCl3/acetone, 8:1) to afford eight fractions Fr. 5.1-5.8. Fr. 5.3 (500 mg) was subjected to Sephadex LH-20 chromatography (CHCl3/MeOH, 1:1) to afford compounds 1 (3.0 mg) and 2 (2.5 mg). Dihydroberkleasmin A (1): Isolated as white powder, [α]D22= +70° (c = 0.1, MeOH). IR (KBr) vmax: 3,424 (OH), 1,736 (C=O), 1,604 (C=C) cm−1. 13C- (150 MHz, CDCl3) and 1H-NMR (600 MHz, CDCl3): see Table 1. Positive ion ESI-MS m/z (%): 545 [M+Na]+ (21), 1,068 [2M+Na+H]+(7). Positive ion HR-ESI-MS [M+Na]+ m/z 545.3458 (calcd for C30H50O7Na, 545.3454).

4. Conclusions

In summary, we have isolated a new eremophilane-type sesquiterpene, named dihydroberkleasmin A (1), together with one known compound, berkleasmin C (2), from the culture broth of Pestalotiopsis photiniae. Eremophilane-type sesquiterpenes, including those with similar skeletons such as berkleasmins A-C, exist widely as constituents of various plants, while there have been several reports as fungal secondary metabolites mostly from family Xylariaceae. There has been no reported about eremophilane-type sesquiterpenes from the genus Pestalotiopsis.
  2 in total

1.  New spiral γ-lactone enantiomers from the plant endophytic fungus Pestalotiopsis foedan.

Authors:  Xiao-Long Yang; Zhuang-Zhuang Li
Journal:  Molecules       Date:  2013-02-11       Impact factor: 4.411

2.  Two new oxysporone derivatives from the fermentation broth of the endophytic plant fungus Pestalotiopsis karstenii isolated from stems of Camellia sasanqua.

Authors:  Du Qiang Luo; Lei Zhang; Bao Zhong Shi; Xiao Mei Song
Journal:  Molecules       Date:  2012-07-17       Impact factor: 4.411

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.