Literature DB >> 21341076

Restriction fragment length polymorphism typing of mycobacteria.

D van Soolingen1, P E de Haas, K Kremer.   

Abstract

In principle, restriction fragment length polymorphism (RFLP) typing can be applied to strains of all mycobacterial species for which suitable probes have been identified. International consensus has been achieved regarding the methodology of IS6110 RFLP typing of Mycobacterium tuberculosis complex isolates (1) and IS1245 RFLP typing of Mycobacterium avium strains (2). This chapter describes the technical details of these standardized methods regarding the isolation of DNA, restriction enzymes, electrophoresis conditions, internal- and external-size markers, Southern blotting, and several probes used for hybridization. Furthermore, RFLP typing of isolates of some other mycobacterial species is described.

Entities:  

Year:  2001        PMID： 21341076     DOI： 10.1385/1-59259-147-7:165

Source DB:  PubMed          Journal:  Methods Mol Med        ISSN： 1543-1894


  14 in total

1.  Evaluation of a modified single-enzyme amplified-fragment length polymorphism technique for fingerprinting and differentiating of Mycobacterium kansasii type I isolates.

Authors:  Ayman Gaafar; M Josebe Unzaga; Ramón Cisterna; Felicitas Elena Clavo; Elena Urra; Rafael Ayarza; Gloria Martín
Journal:  J Clin Microbiol       Date:  2003-08       Impact factor: 5.948

2.  Biochemical Characterization of Isoniazid-resistant Mycobacterium tuberculosis: Can the Analysis of Clonal Strains Reveal Novel Targetable Pathways?

Authors:  Luisa Maria Nieto R; Carolina Mehaffy; M Nurul Islam; Bryna Fitzgerald; John Belisle; Jessica Prenni; Karen Dobos
Journal:  Mol Cell Proteomics       Date:  2018-05-29       Impact factor: 5.911

3.  Genome sequencing of Mycobacterium abscessus isolates from patients in the united states and comparisons to globally diverse clinical strains.

Authors:  Rebecca M Davidson; Nabeeh A Hasan; Paul R Reynolds; Sarah Totten; Benjamin Garcia; Adrah Levin; Preveen Ramamoorthy; Leonid Heifets; Charles L Daley; Michael Strong
Journal:  J Clin Microbiol       Date:  2014-07-23       Impact factor: 5.948

4.  Production of MPT-64 recombinant protein from virulent strain of Mycobacterium bovis.

Authors:  M Mohammadi Tashakkori; M Tabatabaei; M Tebianian; N Mosavari
Journal:  Iran J Vet Res       Date:  2018       Impact factor: 1.376

5.  The role of speciation in positive Lowenstein-Jensen culture isolates from a high tuberculosis burden country.

Authors:  William Worodria; Jillian Anderson; Adithya Cattamanchi; J Lucian Davis; Saskia den Boon; Alfred Andama; Samuel D Yoo; Moses Joloba; Laurence Huang; Midori Kato-Maeda
Journal:  PLoS One       Date:  2011-11-04       Impact factor: 3.240

6.  Co-infection of Mycobacterium tuberculosis and Pneumocystis jirovecii in the Iranian Patients With Human Immunodeficiency Virus.

Authors:  Maryam Fatemeh Sheikholeslami; Javid Sadraei; Parissa Farnia; Mehdi Forozandeh Moghadam; Hamid Emadi Kochak
Journal:  Jundishapur J Microbiol       Date:  2015-02-20       Impact factor: 0.747

7.  Correlations between major risk factors and closely related Mycobacterium tuberculosis isolates grouped by three current genotyping procedures: a population-based study in northeast Mexico.

Authors:  Katia Peñuelas-Urquides; Herminia Guadalupe Martínez-Rodríguez; José Antonio Enciso-Moreno; Gloria María Molina-Salinas; Beatriz Silva-Ramírez; Gerardo Raymundo Padilla-Rivas; Lucio Vera-Cabrera; Víctor Manuel Torres-de-la-Cruz; Yazmin Berenice Martínez-Martínez; Jorge Luis Ortega-García; Elsa Nancy Garza-Treviño; Leonor Enciso-Moreno; Odila Saucedo-Cárdenas; Pola Becerril-Montes; Salvador Said-Fernández
Journal:  Mem Inst Oswaldo Cruz       Date:  2014-09       Impact factor: 2.743

8.  Comparing isogenic strains of Beijing genotype Mycobacterium tuberculosis after acquisition of Isoniazid resistance: A proteomics approach.

Authors:  Luisa María Nieto R; Carolina Mehaffy; Karen M Dobos
Journal:  Proteomics       Date:  2016-04-13       Impact factor: 3.984

9.  Population structure among mycobacterium tuberculosis isolates from pulmonary tuberculosis patients in Colombia.

Authors:  Teresa Realpe; Nidia Correa; Juan Carlos Rozo; Beatriz Eugenia Ferro; Beatriz Elena Ferro; Verónica Gomez; Elsa Zapata; Wellman Ribon; Gloria Puerto; Claudia Castro; Luisa María Nieto; Maria Lilia Diaz; Oriana Rivera; David Couvin; Nalin Rastogi; Maria Patricia Arbelaez; Jaime Robledo
Journal:  PLoS One       Date:  2014-04-18       Impact factor: 3.240

10.  Use of bacterial whole-genome sequencing to investigate local persistence and spread in bovine tuberculosis.

Authors:  Hannah Trewby; David Wright; Eleanor L Breadon; Samantha J Lycett; Tom R Mallon; Carl McCormick; Paul Johnson; Richard J Orton; Adrian R Allen; Julie Galbraith; Pawel Herzyk; Robin A Skuce; Roman Biek; Rowland R Kao
Journal:  Epidemics       Date:  2015-10-19       Impact factor: 4.396
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.