Literature DB >> 21340044

Using OrPLS to Identify Asymptomatic Women at Risk For Alzheimer's Disease.

William Rayens1, Yushu Liu, Anders Andersen, Charles Smith.   

Abstract

Persons at risk for Alzheimer's disease (AD) demonstrate altered cortical activation measured by functional MRI (fMRI) years before symptoms of disease are expected. We used fMRI to study the differences in cortical activation between 13 women with a family history of AD and at least one apolipoprotein E4 allele, a risk factor for AD, and a control group of 11 women lacking both factors. Our primary goal was to assess how well the two groups are able to be statistically separated, a task which directly affects the performance of post hoc classification. The dimension of the dataset, however, precludes the use of ordinary classification methods. In this paper we show the superiority of using oriented PLS (OrPLS) to accomplish the classification in the presence of this dimensionality problem. We are able to reduce the misclassification rates on the standardized fMRI data from an average of about 48% for PCA, to an average of 27% for PLS, and then to perfect classification for OrPLS.

Entities:  

Year:  2008        PMID: 21340044      PMCID: PMC3039878          DOI: 10.1002/cem.1172

Source DB:  PubMed          Journal:  J Chemother        ISSN: 1120-009X            Impact factor:   1.714


  7 in total

1.  Source identification of underground fuel spills by solid-phase microextraction/high-resolution gas chromatography/genetic algorithms.

Authors:  B K Lavine; J Ritter; A J Moores; M Wilson; A Faruque; H T Mayfield
Journal:  Anal Chem       Date:  2000-01-15       Impact factor: 6.986

2.  Machine learning based pattern recognition applied to microarray data.

Authors:  Barry K Lavine; Charles E Davidson; William S Rayens
Journal:  Comb Chem High Throughput Screen       Date:  2004-03       Impact factor: 1.339

3.  Detection and identification of bacteria using antibiotic susceptibility and a multi-array electrochemical sensor with pattern recognition.

Authors:  Jason Karasinski; Leslie White; Yachao Zhang; Eric Wang; Silvana Andreescu; Omowunmi A Sadik; Barry K Lavine; Mehul Vora
Journal:  Biosens Bioelectron       Date:  2006-12-12       Impact factor: 10.618

4.  Altered brain activation in cognitively intact individuals at high risk for Alzheimer's disease.

Authors:  C D Smith; A H Andersen; R J Kryscio; F A Schmitt; M S Kindy; L X Blonder; M J Avison
Journal:  Neurology       Date:  1999-10-22       Impact factor: 9.910

5.  Longitudinal functional alterations in asymptomatic women at risk for Alzheimer's disease.

Authors:  C D Smith; R J Kryscio; F A Schmitt; M A Lovell; L X Blonder; W S Rayens; A H Andersen
Journal:  J Neuroimaging       Date:  2005-07       Impact factor: 2.486

6.  Multiarray sensors with pattern recognition for the detection, classification, and differentiation of bacteria at subspecies and strain levels.

Authors:  Jason Karasinski; Silvana Andreescu; Omowunmi A Sadik; Barry Lavine; Mehul N Vora
Journal:  Anal Chem       Date:  2005-12-15       Impact factor: 6.986

7.  Diagnosis of dementias using partial least squares discriminant analysis.

Authors:  J Gottfries; K Blennow; A Wallin; C G Gottfries
Journal:  Dementia       Date:  1995 Mar-Apr
  7 in total
  1 in total

1.  Partial least squares for discrimination in fMRI data.

Authors:  Anders H Andersen; William S Rayens; Yushu Liu; Charles D Smith
Journal:  Magn Reson Imaging       Date:  2012-01-05       Impact factor: 2.546

  1 in total

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