Literature DB >> 21337010

A structural view of the conserved domain of rice stress-responsive NAC1.

Qingfeng Chen1, Quan Wang, Lizhong Xiong, Zhiyong Lou.   

Abstract

The importance of NAC (named as NAM, ATAF1, 2, and CUC2) proteins in plant development, transcription regulation and regulatory pathways involving protein-protein interactions has been increasingly recognized. We report here the high resolution crystal structure of SNAC1 (stress-responsive NAC) NAC domain at 2.5 Å. Although the structure of the SNAC1 NAC domain shares a structural similarity with the reported structure of the ANAC NAC1 domain, some key features, especially relating to two loop regions which potentially take the responsibility for DNA-binding, distinguish the SNAC1 NAC domain from other reported NAC structures. Moreover, the dimerization of the SNAC1 NAC domain is demonstrated by both soluble and crystalline conditions, suggesting this dimeric state should be conserved in this type of NAC family. Additionally, we discuss the possible NAC-DNA binding model according to the structure and reported biological evidences.

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Year:  2011        PMID: 21337010      PMCID: PMC4875291          DOI: 10.1007/s13238-011-1010-9

Source DB:  PubMed          Journal:  Protein Cell        ISSN: 1674-800X            Impact factor:   14.870


  46 in total

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Authors:  Heidi A Ernst; Addie Nina Olsen; Sine Larsen; Leila Lo Leggio
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2.  The transcription factor ATAF2 represses the expression of pathogenesis-related genes in Arabidopsis.

Authors:  Christian Delessert; Kemal Kazan; Iain W Wilson; Dominique Van Der Straeten; John Manners; Elizabeth S Dennis; Rudy Dolferus
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4.  Systematic sequence analysis and identification of tissue-specific or stress-responsive genes of NAC transcription factor family in rice.

Authors:  Yujie Fang; Jun You; Kabin Xie; Weibo Xie; Lizhong Xiong
Journal:  Mol Genet Genomics       Date:  2008-09-24       Impact factor: 3.291

5.  MYB83 is a direct target of SND1 and acts redundantly with MYB46 in the regulation of secondary cell wall biosynthesis in Arabidopsis.

Authors:  Ryan L McCarthy; Ruiqin Zhong; Zheng-Hua Ye
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6.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

7.  Transcription factors in rice: a genome-wide comparative analysis between monocots and eudicots.

Authors:  Yuqing Xiong; Tieyan Liu; Chaoguang Tian; Shouhong Sun; Jiayang Li; Mingsheng Chen
Journal:  Plant Mol Biol       Date:  2005-09       Impact factor: 4.076

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Journal:  Plant Cell       Date:  2005-02-10       Impact factor: 11.277

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Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
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  33 in total

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Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-12-24

2.  Structural basis for the neutralization and specificity of Staphylococcal enterotoxin B against its MHC Class II binding site.

Authors:  Tian Xia; Shuaiyi Liang; Huajing Wang; Shi Hu; Yuna Sun; Xiaojie Yu; Jun Han; Jun Li; Shangjing Guo; Jianxin Dai; Zhiyong Lou; Yajun Guo
Journal:  MAbs       Date:  2014 Jan-Feb       Impact factor: 5.857

3.  A STRESS-RESPONSIVE NAC1-regulated protein phosphatase gene rice protein phosphatase18 modulates drought and oxidative stress tolerance through abscisic acid-independent reactive oxygen species scavenging in rice.

Authors:  Jun You; Wei Zong; Honghong Hu; Xianghua Li; Jinghua Xiao; Lizhong Xiong
Journal:  Plant Physiol       Date:  2014-10-15       Impact factor: 8.340

4.  In silico analysis on structure and DNA binding mode of AtNAC1, a NAC transcription factor from Arabidopsis thaliana.

Authors:  Qiankun Zhu; Jiaxin Zou; Mengli Zhu; Zubi Liu; Peichun Feng; Gaotao Fan; Wanjun Wang; Hai Liao
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5.  The nucleoprotein of severe fever with thrombocytopenia syndrome virus processes a stable hexameric ring to facilitate RNA encapsidation.

Authors:  Honggang Zhou; Yuna Sun; Ying Wang; Min Liu; Chao Liu; Wenming Wang; Xiang Liu; Le Li; Fei Deng; Hualin Wang; Yu Guo; Zhiyong Lou
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6.  GmNAC30 and GmNAC81 integrate the endoplasmic reticulum stress- and osmotic stress-induced cell death responses through a vacuolar processing enzyme.

Authors:  Giselle C Mendes; Pedro A B Reis; Iara P Calil; Humberto H Carvalho; Francisco J L Aragão; Elizabeth P B Fontes
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-21       Impact factor: 11.205

7.  Molecular cloning and expression analysis of 13 NAC transcription factors in Miscanthus lutarioriparius.

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8.  Involvement of NAC transcription factor SiNAC1 in a positive feedback loop via ABA biosynthesis and leaf senescence in foxtail millet.

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Journal:  Planta       Date:  2017-09-04       Impact factor: 4.116

Review 9.  The NAC side of the fruit: tuning of fruit development and maturation.

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Journal:  BMC Plant Biol       Date:  2021-05-27       Impact factor: 4.215

10.  The biotechnological importance of the plant-specific NAC transcription factor family in crop improvement.

Authors:  Sadhana Singh; Hiroyuki Koyama; Kaushal K Bhati; Anshu Alok
Journal:  J Plant Res       Date:  2021-02-22       Impact factor: 2.629

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