Warning: Undefined array key "mm" in /www/wwwroot/www.ai-bt.com/si.php on line 10 Deprecated: trim(): Passing null to parameter #1 ($string) of type string is deprecated in /www/wwwroot/www.ai-bt.com/si.php on line 10 Screening for antimicrobial resistance genes and virulence factors via genome sequencing.

Literature DB >> 21335393

Screening for antimicrobial resistance genes and virulence factors via genome sequencing.

Mads Bennedsen¹, Birgitte Stuer-Lauridsen, Morten Danielsen, Eric Johansen.

Abstract

Second-generation genome sequencing and alignment of the resulting reads to in silico genomes containing antimicrobial resistance and virulence factor genes were used to screen for undesirable genes in 28 strains which could be used in human nutrition. No virulence factor genes were detected, while several isolates contained antimicrobial resistance genes.

Entities: Species

Mesh：

Substances：

Year: 2011 PMID： 21335393 PMCID： PMC3126367 DOI： 10.1128/AEM.02493-10

Source DB: PubMed Journal: Appl Environ Microbiol ISSN： 0099-2240 Impact factor: 4.792

6 in total

1. Genetic basis of tetracycline resistance in Bifidobacterium animalis subsp. lactis.

Authors: Miguel Gueimonde; Ana Belén Flórez; Angela H A M van Hoek; Birgitte Stuer-Lauridsen; Per Strøman; Clara G de los Reyes-Gavilán; Abelardo Margolles
Journal: Appl Environ Microbiol Date: 2010-03-26 Impact factor: 4.792

2. Antimicrobial susceptibility of Bifidobacterium strains from humans, animals and probiotic products.

Authors: L Masco; K Van Hoorde; E De Brandt; J Swings; G Huys
Journal: J Antimicrob Chemother Date: 2006-05-12 Impact factor: 5.790

3. The genome sequence of the probiotic intestinal bacterium Lactobacillus johnsonii NCC 533.

Authors: R David Pridmore; Bernard Berger; Frank Desiere; David Vilanova; Caroline Barretto; Anne-Cecile Pittet; Marie-Camille Zwahlen; Martine Rouvet; Eric Altermann; Rodolphe Barrangou; Beat Mollet; Annick Mercenier; Todd Klaenhammer; Fabrizio Arigoni; Mark A Schell
Journal: Proc Natl Acad Sci U S A Date: 2004-02-24 Impact factor: 11.205

4. ARDB--Antibiotic Resistance Genes Database.

Authors: Bo Liu; Mihai Pop
Journal: Nucleic Acids Res Date: 2008-10-02 Impact factor: 16.971

5. VFDB 2008 release: an enhanced web-based resource for comparative pathogenomics.

Authors: Jian Yang; Lihong Chen; Lilian Sun; Jun Yu; Qi Jin
Journal: Nucleic Acids Res Date: 2007-11-04 Impact factor: 16.971

6. Database resources of the National Center for Biotechnology Information.

Authors: David L Wheeler; Tanya Barrett; Dennis A Benson; Stephen H Bryant; Kathi Canese; Vyacheslav Chetvernin; Deanna M Church; Michael Dicuccio; Ron Edgar; Scott Federhen; Michael Feolo; Lewis Y Geer; Wolfgang Helmberg; Yuri Kapustin; Oleg Khovayko; David Landsman; David J Lipman; Thomas L Madden; Donna R Maglott; Vadim Miller; James Ostell; Kim D Pruitt; Gregory D Schuler; Martin Shumway; Edwin Sequeira; Steven T Sherry; Karl Sirotkin; Alexandre Souvorov; Grigory Starchenko; Roman L Tatusov; Tatiana A Tatusova; Lukas Wagner; Eugene Yaschenko
Journal: Nucleic Acids Res Date: 2007-11-27 Impact factor: 16.971

6 in total

17 in total

1. Multilocus sequence typing of total-genome-sequenced bacteria.

Authors: Mette V Larsen; Salvatore Cosentino; Simon Rasmussen; Carsten Friis; Henrik Hasman; Rasmus Lykke Marvig; Lars Jelsbak; Thomas Sicheritz-Pontén; David W Ussery; Frank M Aarestrup; Ole Lund
Journal: J Clin Microbiol Date: 2012-01-11 Impact factor: 5.948

2. Feasibility of Genome-Wide Screening for Biosafety Assessment of Probiotics: A Case Study of Lactobacillus helveticus MTCC 5463.

Authors: S Senan; J B Prajapati; C G Joshi
Journal: Probiotics Antimicrob Proteins Date: 2015-12 Impact factor: 4.609

3. Safety Evaluation and Colonisation Abilities of Four Lactic Acid Bacteria as Future Probiotics.

Authors: Ziyanda C Dlamini; Rashwahla L S Langa; Olayinka A Aiyegoro; Anthony I Okoh
Journal: Probiotics Antimicrob Proteins Date: 2019-06 Impact factor: 4.609

Review 4. Pro-biomics: Omics Technologies To Unravel the Role of Probiotics in Health and Disease.

Authors: Despoina Eugenia Kiousi; Marina Rathosi; Margaritis Tsifintaris; Pelagia Chondrou; Alex Galanis
Journal: Adv Nutr Date: 2021-10-01 Impact factor: 8.701

5. Identification of acquired antimicrobial resistance genes.

Authors: Ea Zankari; Henrik Hasman; Salvatore Cosentino; Martin Vestergaard; Simon Rasmussen; Ole Lund; Frank M Aarestrup; Mette Voldby Larsen
Journal: J Antimicrob Chemother Date: 2012-07-10 Impact factor: 5.790

6. Antibiotic resistance in probiotic bacteria.

Authors: Miguel Gueimonde; Borja Sánchez; Clara G de Los Reyes-Gavilán; Abelardo Margolles
Journal: Front Microbiol Date: 2013-07-18 Impact factor: 5.640

Review 7. The art of strain improvement of industrial lactic acid bacteria without the use of recombinant DNA technology.

Authors: Patrick M F Derkx; Thomas Janzen; Kim I Sørensen; Jeffrey E Christensen; Birgitte Stuer-Lauridsen; Eric Johansen
Journal: Microb Cell Fact Date: 2014-08-29 Impact factor: 5.328

8. Lactobacillus ruminis strains cluster according to their mammalian gut source.

Authors: Michelle M O' Donnell; Hugh Michael B Harris; Denise B Lynch; Reynolds Paul Ross; Paul W O'Toole
Journal: BMC Microbiol Date: 2015-04-01 Impact factor: 3.605

9. A platform for leveraging next generation sequencing for routine microbiology and public health use.

Authors: Laura I Rusu; Kelly L Wyres; Matthias Reumann; Carlos Queiroz; Alexe Bojovschi; Tom Conway; Saurabh Garg; David J Edwards; Geoff Hogg; Kathryn E Holt
Journal: Health Inf Sci Syst Date: 2015-02-24

10. Comparative genome analysis of Streptococcus infantarius subsp. infantarius CJ18, an African fermented camel milk isolate with adaptations to dairy environment.

Authors: Christoph Jans; Rainer Follador; Mira Hochstrasser; Christophe Lacroix; Leo Meile; Marc J A Stevens
Journal: BMC Genomics Date: 2013-03-22 Impact factor: 3.969