Literature DB >> 21334448

Elucidating metabolic pathways for amino acid incorporation into dragline spider silk using 13C enrichment and solid state NMR.

Melinda S Creager1, Thomas Izdebski, Amanda E Brooks, Randolph V Lewis.   

Abstract

Spider silk has been evolutionarily optimized for contextual mechanical performance over the last 400 Ma. Despite precisely balanced mechanical properties, which have yet to be reproduced, the underlying molecular architecture of major ampullate spider silk can be simplified being viewed as a versatile block copolymer. Four primary amino acid motifs: polyalanine, (GA)(n), GPGXX, and GGX (X = G,A,S,Q,L,Y) will be considered in this study. Although synthetic mimetics of many of these amino acid motifs have been produced in several biological systems, the source of spider silk's mechanical integrity remains elusive. Mechanical robustness may be a product not only of the amino acid structure but also of the tertiary structure of the silk. Historically, solid state nuclear magnetic resonance (ssNMR) has been used to reveal the crystalline structure of the polyalanine motif; however, limitations in amino acid labeling techniques have obscured the structures of the GGX and GPGXX motifs thought to be responsible for the structural mobility of spider silk. We describe the use of metabolic pathways to label tyrosine for the first time as well as to improve the labeling efficiency of proline. These improved labeling techniques will allow the previously unknown tertiary structures of major ampullate silk to be probed.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21334448      PMCID: PMC3624022          DOI: 10.1016/j.cbpa.2011.02.010

Source DB:  PubMed          Journal:  Comp Biochem Physiol A Mol Integr Physiol        ISSN: 1095-6433            Impact factor:   2.320


  18 in total

1.  Extreme diversity, conservation, and convergence of spider silk fibroin sequences.

Authors:  J Gatesy; C Hayashi; D Motriuk; J Woods; R Lewis
Journal:  Science       Date:  2001-03-30       Impact factor: 47.728

2.  The molecular structure of spider dragline silk: folding and orientation of the protein backbone.

Authors:  J D van Beek; S Hess; F Vollrath; B H Meier
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-29       Impact factor: 11.205

3.  Isolation of a clone encoding a second dragline silk fibroin. Nephila clavipes dragline silk is a two-protein fiber.

Authors:  M B Hinman; R V Lewis
Journal:  J Biol Chem       Date:  1992-09-25       Impact factor: 5.157

4.  Solid-state NMR evidence for elastin-like beta-turn structure in spider dragline silk.

Authors:  Janelle E Jenkins; Melinda S Creager; Emily B Butler; Randolph V Lewis; Jeffery L Yarger; Gregory P Holland
Journal:  Chem Commun (Camb)       Date:  2010-08-23       Impact factor: 6.222

5.  Structure of a protein superfiber: spider dragline silk.

Authors:  M Xu; R V Lewis
Journal:  Proc Natl Acad Sci U S A       Date:  1990-09       Impact factor: 11.205

6.  Comparison of interlaboratory variation in amino acid analysis and rat growth assays for evaluating protein quality.

Authors:  G Sarwar; R Blair; M Friedman; M R Gumbmann; L R Hackler; P L Pellett; T K Smith
Journal:  J Assoc Off Anal Chem       Date:  1985 Jan-Feb

7.  Protein and amino acid composition of silks from the cob weaver, Latrodectus hesperus (black widow).

Authors:  M L Casem; D Turner; K Houchin
Journal:  Int J Biol Macromol       Date:  1999 Mar-Apr       Impact factor: 6.953

8.  Toxicity of free proline revealed in an arabidopsis T-DNA-tagged mutant deficient in proline dehydrogenase.

Authors:  Tokihiko Nanjo; Miki Fujita; Motoaki Seki; Tomohiko Kato; Satoshi Tabata; Kazuo Shinozaki
Journal:  Plant Cell Physiol       Date:  2003-05       Impact factor: 4.927

9.  Variation of mechanical properties with amino acid content in the silk of Nephila clavipes.

Authors:  David B Zax; Daniel E Armanios; Sally Horak; Chris Brodowski; Chris Malowniak; Zhitong Yang
Journal:  Biomacromolecules       Date:  2004 May-Jun       Impact factor: 6.988

10.  Rotational-echo double-resonance in complex biopolymers: a study of Nephila clavipes dragline silk.

Authors:  C A Michal; L W Jelinski
Journal:  J Biomol NMR       Date:  1998-08       Impact factor: 2.835

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  3 in total

1.  Photoresponsive retinal-modified silk-elastin copolymer.

Authors:  Zhongyuan Sun; Guokui Qin; Xiaoxia Xia; Mark Cronin-Golomb; Fiorenzo G Omenetto; David L Kaplan
Journal:  J Am Chem Soc       Date:  2013-02-14       Impact factor: 15.419

2.  β-Sheet nanocrystalline domains formed from phosphorylated serine-rich motifs in caddisfly larval silk: a solid state NMR and XRD study.

Authors:  J Bennett Addison; Nicholas N Ashton; Warner S Weber; Russell J Stewart; Gregory P Holland; Jeffery L Yarger
Journal:  Biomacromolecules       Date:  2013-03-25       Impact factor: 6.988

3.  Variation in protein intake induces variation in spider silk expression.

Authors:  Sean J Blamires; Chun-Lin Wu; I-Min Tso
Journal:  PLoS One       Date:  2012-02-20       Impact factor: 3.240

  3 in total

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