Literature DB >> 21330537

The crystal structure of the signal recognition particle in complex with its receptor.

Sandro F Ataide1, Nikolaus Schmitz, Kuang Shen, Ailong Ke, Shu-ou Shan, Jennifer A Doudna, Nenad Ban.   

Abstract

Cotranslational targeting of membrane and secretory proteins is mediated by the universally conserved signal recognition particle (SRP). Together with its receptor (SR), SRP mediates the guanine triphosphate (GTP)-dependent delivery of translating ribosomes bearing signal sequences to translocons on the target membrane. Here, we present the crystal structure of the SRP:SR complex at 3.9 angstrom resolution and biochemical data revealing that the activated SRP:SR guanine triphosphatase (GTPase) complex binds the distal end of the SRP hairpin RNA where GTP hydrolysis is stimulated. Combined with previous findings, these results suggest that the SRP:SR GTPase complex initially assembles at the tetraloop end of the SRP RNA and then relocalizes to the opposite end of the RNA. This rearrangement provides a mechanism for coupling GTP hydrolysis to the handover of cargo to the translocon.

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Year:  2011        PMID: 21330537      PMCID: PMC3758919          DOI: 10.1126/science.1196473

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  38 in total

1.  Conformational changes in the bacterial SRP receptor FtsY upon binding of guanine nucleotides and SRP.

Authors:  J R Jagath; M V Rodnina; W Wintermeyer
Journal:  J Mol Biol       Date:  2000-01-28       Impact factor: 5.469

2.  Crystal structure of the ribonucleoprotein core of the signal recognition particle.

Authors:  R T Batey; R P Rambo; L Lucast; B Rha; J A Doudna
Journal:  Science       Date:  2000-02-18       Impact factor: 47.728

3.  Important role of the tetraloop region of 4.5S RNA in SRP binding to its receptor FtsY.

Authors:  J R Jagath; N B Matassova; E de Leeuw; J M Warnecke; G Lentzen; M V Rodnina; J Luirink; W Wintermeyer
Journal:  RNA       Date:  2001-02       Impact factor: 4.942

4.  Role of SRP RNA in the GTPase cycles of Ffh and FtsY.

Authors:  P Peluso; S O Shan; S Nock; D Herschlag; P Walter
Journal:  Biochemistry       Date:  2001-12-18       Impact factor: 3.162

Review 5.  The signal recognition particle.

Authors:  R J Keenan; D M Freymann; R M Stroud; P Walter
Journal:  Annu Rev Biochem       Date:  2001       Impact factor: 23.643

6.  Induced nucleotide specificity in a GTPase.

Authors:  Shu-ou Shan; Peter Walter
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-27       Impact factor: 11.205

7.  Crystal structure of the complete core of archaeal signal recognition particle and implications for interdomain communication.

Authors:  Ken R Rosendal; Klemens Wild; Guillermo Montoya; Irmgard Sinning
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-01       Impact factor: 11.205

8.  Evolutionary conserved nucleotides within the E.coli 4.5S RNA are required for association with P48 in vitro and for optimal function in vivo.

Authors:  H Wood; J Luirink; D Tollervey
Journal:  Nucleic Acids Res       Date:  1992-11-25       Impact factor: 16.971

9.  Structural and energetic analysis of metal ions essential to SRP signal recognition domain assembly.

Authors:  Robert T Batey; Jennifer A Doudna
Journal:  Biochemistry       Date:  2002-10-01       Impact factor: 3.162

10.  Transport route for synaptobrevin via a novel pathway of insertion into the endoplasmic reticulum membrane.

Authors:  U Kutay; G Ahnert-Hilger; E Hartmann; B Wiedenmann; T A Rapoport
Journal:  EMBO J       Date:  1995-01-16       Impact factor: 11.598

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  67 in total

1.  Reprogramming chaperone pathways to improve membrane protein expression in Escherichia coli.

Authors:  Brent L Nannenga; François Baneyx
Journal:  Protein Sci       Date:  2011-07-07       Impact factor: 6.725

2.  Structural basis for the molecular evolution of SRP-GTPase activation by protein.

Authors:  Gert Bange; Nico Kümmerer; Przemyslaw Grudnik; Robert Lindner; Georg Petzold; Dieter Kressler; Ed Hurt; Klemens Wild; Irmgard Sinning
Journal:  Nat Struct Mol Biol       Date:  2011-11-06       Impact factor: 15.369

3.  Structural basis for the interaction of a hexameric replicative helicase with the regulatory subunit of human DNA polymerase α-primase.

Authors:  Bo Zhou; Diana R Arnett; Xian Yu; Aaron Brewster; Gregory A Sowd; Charlies L Xie; Stefan Vila; Dahai Gai; Ellen Fanning; Xiaojiang S Chen
Journal:  J Biol Chem       Date:  2012-06-14       Impact factor: 5.157

Review 4.  Protein secretion and the endoplasmic reticulum.

Authors:  Adam M Benham
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-08-01       Impact factor: 10.005

5.  Translational arrest by a prokaryotic signal recognition particle is mediated by RNA interactions.

Authors:  Bertrand Beckert; Alexej Kedrov; Daniel Sohmen; Georg Kempf; Klemens Wild; Irmgard Sinning; Henning Stahlberg; Daniel N Wilson; Roland Beckmann
Journal:  Nat Struct Mol Biol       Date:  2015-09-07       Impact factor: 15.369

6.  SIMIBI twins in protein targeting and localization.

Authors:  Gert Bange; Irmgard Sinning
Journal:  Nat Struct Mol Biol       Date:  2013-07       Impact factor: 15.369

7.  Molecular mechanism of GTPase activation at the signal recognition particle (SRP) RNA distal end.

Authors:  Kuang Shen; Yaqiang Wang; Yu-Hsien Hwang Fu; Qi Zhang; Juli Feigon; Shu-ou Shan
Journal:  J Biol Chem       Date:  2013-10-22       Impact factor: 5.157

Review 8.  A tale of two GTPases in cotranslational protein targeting.

Authors:  Ishu Saraogi; David Akopian; Shu-Ou Shan
Journal:  Protein Sci       Date:  2011-09-27       Impact factor: 6.725

9.  Ribosome-Associated Chloroplast SRP54 Enables Efficient Cotranslational Membrane Insertion of Key Photosynthetic Proteins.

Authors:  Athina Hristou; Ines Gerlach; Dominique S Stolle; Jennifer Neumann; Annika Bischoff; Beatrix Dünschede; Marc M Nowaczyk; Reimo Zoschke; Danja Schünemann
Journal:  Plant Cell       Date:  2019-08-23       Impact factor: 11.277

10.  The structural basis of FtsY recruitment and GTPase activation by SRP RNA.

Authors:  Felix Voigts-Hoffmann; Nikolaus Schmitz; Kuang Shen; Shu-Ou Shan; Sandro F Ataide; Nenad Ban
Journal:  Mol Cell       Date:  2013-11-07       Impact factor: 17.970

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