Literature DB >> 21329384

Multiple reaction monitoring assay for pre-eclampsia related calcyclin peptides in formalin fixed paraffin embedded placenta.

Coşkun Güzel1, Nicolette T C Ursem, Lennard J Dekker, Pieter Derkx, Jos Joore, Evert van Dijk, Gerard Ligtvoet, Eric A P Steegers, Theo M Luider.   

Abstract

Although the cause of pre-eclampsia during pregnancy has not been elucidated yet, it is evident that placental and maternal endothelial dysfunction is involved. We previously demonstrated that in early onset pre-eclampsia placental calcyclin (S100A6) expression is significantly higher compared to controls ( De Groot , C. J. ; Clin. Proteomics 2007 , 1 , 325 ). In the current study, the results were confirmed and relatively quantified by using multiple reaction monitoring (MRM) on two peptide fragments of calcyclin. Cells were obtained from control (n = 5) and pre-eclamptic placental (n = 5) tissue collected by laser capture microdissection from formalin-fixed paraffin-embedded (FFPE) material treated with a solution to reverse formalin fixation. Two calcyclin peptides with an extra glycine inserted in the middle of the amino acid sequence were synthesized and used as an internal reference. Data presented show that MRM on laser microdissected material from FFPE tissue material is possible. The developed MRM assay to study quantitative levels of proteins in FFPE laser microdissected cells using nonisotopic-labeled chemical analogs of mass tagged internal references showed that in pre-eclamptic patients elevated levels of calcyclin is observed in placental trophoblast cells compared to normal trophoblast cells. By immunohistochemistry, we were able to confirm this observation in a qualitative manner.

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Year:  2011        PMID: 21329384     DOI: 10.1021/pr1010795

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  12 in total

1.  Downregulation of antigen presentation-associated pathway proteins is linked to poor outcome in triple-negative breast cancer patient tumors.

Authors:  Martin H Pedersen; Brian L Hood; Hans Christian Beck; Thomas P Conrads; Henrik J Ditzel; Rikke Leth-Larsen
Journal:  Oncoimmunology       Date:  2017-03-16       Impact factor: 8.110

2.  Identifying Ca2+-binding sites in proteins by liquid chromatography-mass spectrometry using Ca2+-directed dissociations.

Authors:  Azadeh Jamalian; Evert-Jan Sneekes; Hans Wienk; Lennard J M Dekker; Paul J A Ruttink; Mario Ursem; Theo M Luider; Peter C Burgers
Journal:  Mol Cell Proteomics       Date:  2014-07-14       Impact factor: 5.911

3.  Proteomic identification of immunoproteasome accumulation in formalin-fixed rodent spinal cords with experimental autoimmune encephalomyelitis.

Authors:  Mohit Raja Jain; Qing Li; Tong Liu; Joseph Rinaggio; Amit Ketkar; Vincent Tournier; Kiran Madura; Stella Elkabes; Hong Li
Journal:  J Proteome Res       Date:  2012-02-06       Impact factor: 4.466

4.  Optimized Protocol for Quantitative Multiple Reaction Monitoring-Based Proteomic Analysis of Formalin-Fixed, Paraffin-Embedded Tissues.

Authors:  Jacob J Kennedy; Jeffrey R Whiteaker; Regine M Schoenherr; Ping Yan; Kimberly Allison; Melissa Shipley; Melissa Lerch; Andrew N Hoofnagle; Geoffrey Stuart Baird; Amanda G Paulovich
Journal:  J Proteome Res       Date:  2016-07-27       Impact factor: 4.466

5.  Selected Reaction Monitoring (SRM) Analysis of Epidermal Growth Factor Receptor (EGFR) in Formalin Fixed Tumor Tissue.

Authors:  Todd Hembrough; Sheeno Thyparambil; Wei-Li Liao; Marlene M Darfler; Joseph Abdo; Kathleen M Bengali; Paul Taylor; Jiefei Tong; Humberto Lara-Guerra; Thomas K Waddell; Michael F Moran; Ming-Sound Tsao; David B Krizman; Jon Burrows
Journal:  Clin Proteomics       Date:  2012-05-03       Impact factor: 3.988

6.  Precision of multiple reaction monitoring mass spectrometry analysis of formalin-fixed, paraffin-embedded tissue.

Authors:  Robert W Sprung; Misti A Martinez; Kristen L Carpenter; Amy-Joan L Ham; Mary Kay Washington; Carlos L Arteaga; Melinda E Sanders; Daniel C Liebler
Journal:  J Proteome Res       Date:  2012-05-07       Impact factor: 4.466

7.  Identification of Site-Specific Stroke Biomarker Candidates by Laser Capture Microdissection and Labeled Reference Peptide.

Authors:  Tingting Lian; Daixin Qu; Xu Zhao; Lixia Yu; Bing Gao
Journal:  Int J Mol Sci       Date:  2015-06-11       Impact factor: 5.923

Review 8.  Applications of mass spectrometry for quantitative protein analysis in formalin-fixed paraffin-embedded tissues.

Authors:  Carine Steiner; Axel Ducret; Jean-Christophe Tille; Marlene Thomas; Thomas A McKee; Laura Rubbia-Brandt; Alexander Scherl; Pierre Lescuyer; Paul Cutler
Journal:  Proteomics       Date:  2014-03       Impact factor: 3.984

9.  Proteomic alterations in early stage cervical cancer.

Authors:  Coşkun Güzel; Natalia I Govorukhina; G Bea A Wisman; Christoph Stingl; Lennard J M Dekker; Harry G Klip; Harry Hollema; Victor Guryev; Peter L Horvatovich; Ate G J van der Zee; Rainer Bischoff; Theo M Luider
Journal:  Oncotarget       Date:  2018-04-06

Review 10.  Elucidating the Pathogenesis of Pre-eclampsia Using In Vitro Models of Spiral Uterine Artery Remodelling.

Authors:  Ross McNally; Abdelrahim Alqudah; Danilo Obradovic; Lana McClements
Journal:  Curr Hypertens Rep       Date:  2017-10-23       Impact factor: 5.369

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