| Literature DB >> 21326878 |
Piero Poletti1, Marco Ajelli, Stefano Merler.
Abstract
BACKGROUND: The 2009 H1N1 pandemic influenza dynamics in Italy was characterized by a notable pattern: as it emerged from the analysis of influenza-like illness data, after an initial period (September-mid-October 2009) characterized by a slow exponential increase in the weekly incidence, a sudden and sharp increase of the growth rate was observed by mid-October. The aim here is to understand whether spontaneous behavioral changes in the population could be responsible for such a pattern of epidemic spread. METHODOLOGY/PRINCIPALEntities:
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Year: 2011 PMID: 21326878 PMCID: PMC3034726 DOI: 10.1371/journal.pone.0016460
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Comparing observed ILI incidence and model simulations.
a Weekly ILI incidence as reported to the surveillance system (green) and weekly incidence simulated by a “simple” SIR model (blue). Sub-panel shows the same curves in a logarithmic scale. Parameter values assumed in the simulation are: the generation time days [48]–[50] and , according to a serological survey on the Italian population [47]. Parameter values estimated via model fit are: , and . b Weekly ILI incidence as reported to the surveillance system (green) and weekly incidence simulated by a SIR model assuming a time-dependent transmission rate (blue). Sub-panel shows the same curves in a logarithmic scale. Assumed parameters are: days and . Values of the fitted parameters are: , , for weeks 38–41.58 and for weeks 41.58–51. c Weekly ILI incidence as reported to the surveillance system (green) and weekly incidence simulated by the proposed model (red). Sub-panel shows the same curves in a logarithmic scale. Assumed parameters are: days, , and . The values of the fitted parameters are: , , , , , and . In addition, the estimates of the reporting factor as obtained by fitting the three models and reported in a, b and c (namely, 17.4%, 16.7% and 16.9%, respectively) are in good agreement with the range 18%–20.2% estimated in [30].
Figure 2Risk perception, antivirals purchase and reporting factor.
a Weekly purchase of antiviral drugs (light blue, scale on the left axis) and weekly ILI incidence as reported to the surveillance system (green, scale on the right axis) during the 2009–2010 pandemic in Italy. b Light blue points (scale on the left axis) represent the weekly excess of the purchase of antiviral drugs. The latter is defined as the difference between the actual and the expected amount of antiviral drugs purchased (which is assumed to be proportional to ILI incidence, and the proportionality constant is computed as the number of antivirals purchased divided by the ILI incidence averaged over weeks 43–51, i.e. in the period of sustained transmission). Light blue line represents the best linear model fit to the excess of purchased antivirals. Horizontal black line represents the threshold over which the number of antivirals purchased is larger than the expected one. Grey area represents the maximum and the minimum excess of antiviral drugs purchased over the weeks 43–51. Red points (scale on the right axis) represent the perceived prevalence of infection simulated by the model parameterized as in Fig. 1c. c Weekly reporting factor estimates that enable the simple SIR model (parameters as in Fig. 1a) to exactly fit the reported ILI incidence. The horizontal gray line represents the average reporting factor as computed over the weeks 42–50.
Figure 3The impact of risk perception.
Weekly ILI incidence as reported to the surveillance system (green) and incidence simulated by the model (red; parameter values as in Fig. 1c). Weekly incidence simulated by the “classical” SIR model (blue; parameter values as in Fig. 1a but for ).