Literature DB >> 21322654

Communication: Accurate determination of side-chain torsion angle χ1 in proteins: phenylalanine residues.

R Suardíaz1, R Crespo-Otero, C Pérez, J San Fabián, J M García de la Vega.   

Abstract

Quantitative side-chain torsion angle χ(1) determinations of phenylalanine residues in Desulfovibrio vulgaris flavodoxin are carried out using exclusively the correlation between the experimental vicinal coupling constants and theoretically determined Karplus equations. Karplus coefficients for nine vicinal coupling related with the torsion angle χ(1) were calculated using the B3LYP functional and basis sets of different size. Optimized χ(1) angles are in outstanding agreement with those previously reported by employing x ray and NMR measurements.

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Year:  2011        PMID: 21322654     DOI: 10.1063/1.3553204

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  2 in total

1.  Conformational and NMR study of some furan derivatives by DFT methods.

Authors:  David Santos-Carballal; Reynier Suardíaz; Rachel Crespo-Otero; Leandro González; Carlos S Pérez
Journal:  J Mol Model       Date:  2013-08-22       Impact factor: 1.810

2.  Toward a Computational NMR Procedure for Modeling Dipeptide Side-Chain Conformation.

Authors:  Jesús San Fabián; Ignacio Ema; Salama Omar; Jose Manuel García de la Vega
Journal:  J Chem Inf Model       Date:  2021-11-11       Impact factor: 4.956

  2 in total

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