Literature DB >> 21319819

On the origins of core-electron chemical shifts of small biomolecules in aqueous solution: insights from photoemission and ab initio calculations of glycine(aq).

Niklas Ottosson1, Knut J Børve, Daniel Spångberg, Henrik Bergersen, Leif J Sæthre, Manfred Faubel, Wandared Pokapanich, Gunnar Öhrwall, Olle Björneholm, Bernd Winter.   

Abstract

The local electronic structure of glycine in neutral, basic, and acidic aqueous solution is studied experimentally by X-ray photoelectron spectroscopy and theoretically by molecular dynamics simulations accompanied by first-principle electronic structure and spectrum calculations. Measured and computed nitrogen and carbon 1s binding energies are assigned to different local atomic environments, which are shown to be sensitive to the protonation/deprotonation of the amino and carboxyl functional groups at different pH values. We report the first accurate computation of core-level chemical shifts of an aqueous solute in various protonation states and explicitly show how the distributions of photoelectron binding energies (core-level peak widths) are related to the details of the hydrogen bond configurations, i.e. the geometries of the water solvation shell and the associated electronic screening. The comparison between the experiments and calculations further enables the separation of protonation-induced (covalent) and solvent-induced (electrostatic) screening contributions to the chemical shifts in the aqueous phase. The present core-level line shape analysis facilitates an accurate interpretation of photoelectron spectra from larger biomolecular solutes than glycine.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21319819     DOI: 10.1021/ja110321q

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  4 in total

1.  Emulator-based decomposition for structural sensitivity of core-level spectra.

Authors:  J Niskanen; A Vladyka; J Niemi; C J Sahle
Journal:  R Soc Open Sci       Date:  2022-06-08       Impact factor: 3.653

2.  Efficient and Flexible Computation of Many-Electron Wave Function Overlaps.

Authors:  Felix Plasser; Matthias Ruckenbauer; Sebastian Mai; Markus Oppel; Philipp Marquetand; Leticia González
Journal:  J Chem Theory Comput       Date:  2016-02-25       Impact factor: 6.006

3.  Electronic Structure and Solvation Effects from Core and Valence Photoelectron Spectroscopy of Serum Albumin.

Authors:  Jean-Philippe Renault; Lucie Huart; Aleksandar R Milosavljević; John D Bozek; Jerôme Palaudoux; Jean-Michel Guigner; Laurent Marichal; Jocelyne Leroy; Frank Wien; Marie-Anne Hervé Du Penhoat; Christophe Nicolas
Journal:  Int J Mol Sci       Date:  2022-07-26       Impact factor: 6.208

4.  Effect of X-ray spot size on liquid jet photoelectron spectroscopy.

Authors:  Giorgia Olivieri; Alok Goel; Armin Kleibert; Matthew A Brown
Journal:  J Synchrotron Radiat       Date:  2015-09-30       Impact factor: 2.616

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.