Literature DB >> 21318352

On the future of "omics": lipidomics.

William J Griffiths1, Michael Ogundare, Christopher M Williams, Yuqin Wang.   

Abstract

Following in the wake of the genomic and proteomic revolutions new fields of "omics" research are emerging. The metabolome provides the natural complement to the genome and proteome, however, the extreme physicochemical diversity of the metabolome leads to a subdivision of metabolites into compounds soluble in aqueous solutions or those soluble in organic solvents. A complete molecular and quantitative investigation of the latter when isolated from tissue, fluid or cells constitutes lipidomics. Like proteomics, lipidomics is a subject which is both technology driven and technology driving, with the primary technologies being mass spectrometry, with or without on-line chromatography and computer-assisted data analysis. In this paper we will examine the underlying fundamentals of different lipidomic experimental approaches including the "shotgun" and "top-down" global approaches, and the more targeted liquid chromatography - or gas chromatography - mass spectrometry approaches. Application of these approaches to the identification of in-born errors of metabolism will be discussed.

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Year:  2011        PMID: 21318352     DOI: 10.1007/s10545-010-9274-4

Source DB:  PubMed          Journal:  J Inherit Metab Dis        ISSN: 0141-8955            Impact factor:   4.982


  55 in total

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Journal:  Rapid Commun Mass Spectrom       Date:  2008-07       Impact factor: 2.419

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  13 in total

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Journal:  Chem Phys Lipids       Date:  2013-12-12       Impact factor: 3.329

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Journal:  Front Physiol       Date:  2012-09-07       Impact factor: 4.566

Review 3.  An Evidence-Based Review of Related Metabolites and Metabolic Network Research on Cerebral Ischemia.

Authors:  Mengting Liu; Liying Tang; Xin Liu; Jing Fang; Hao Zhan; Hongwei Wu; Hongjun Yang
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4.  Liquid chromatography mass spectrometry-based profiling of phosphatidylcholine and phosphatidylethanolamine in the plasma and liver of acetaminophen-induced liver injured mice.

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5.  Comprehensive high-resolution multiple-reaction monitoring mass spectrometry for targeted eicosanoid assays.

Authors:  Carlos Artério Sorgi; Ana Paula Ferranti Peti; Tania Petta; Alyne Fávero Galvão Meirelles; Caroline Fontanari; Luiz Alberto Beraldo de Moraes; Lúcia Helena Faccioli
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6.  Plasma lipid composition and risk of developing cardiovascular disease.

Authors:  Celine Fernandez; Marianne Sandin; Julio L Sampaio; Peter Almgren; Krzysztof Narkiewicz; Michal Hoffmann; Thomas Hedner; Björn Wahlstrand; Kai Simons; Andrej Shevchenko; Peter James; Olle Melander
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7.  Lipoprotein subfractions by nuclear magnetic resonance are associated with tumor characteristics in breast cancer.

Authors:  Vidar G Flote; Riyas Vettukattil; Tone F Bathen; Thore Egeland; Anne McTiernan; Hanne Frydenberg; Anders Husøy; Sissi E Finstad; Jon Lømo; Øystein Garred; Ellen Schlichting; Erik A Wist; Inger Thune
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8.  Plasma Metabolomics Biosignature According to HIV Stage of Infection, Pace of Disease Progression, Viremia Level and Immunological Response to Treatment.

Authors:  Bruno Scarpellini; Michelle Zanoni; Maria Cecilia Araripe Sucupira; Hong-Ha M Truong; Luiz Mario Ramos Janini; Ismael Dale Cotrin Segurado; Ricardo Sobhie Diaz
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9.  Metabolite extraction for high-throughput FTICR-MS-based metabolomics of grapevine leaves.

Authors:  Marisa Maia; Filipa Monteiro; Mónica Sebastiana; Ana Patrícia Marques; António E N Ferreira; Ana Ponces Freire; Carlos Cordeiro; Andreia Figueiredo; Marta Sousa Silva
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Journal:  J Inherit Metab Dis       Date:  2018-02-16       Impact factor: 4.982

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