Literature DB >> 21318350

Is the enzyme a powerful reactant of the biochemical reaction?

Alexander G Foigel1.   

Abstract

The mainstream explanation of enzyme catalysis relies on the assumption that enzymes can utilize the binding energy. The author suggest that (i) an enzyme with excess free energy first gives a group from its active site into the final place of the bound reactant (substrate) in order to break the first initial chemical bond; (ii) this enzyme accepts a similar group from the second bound reactant (or second group in the case of the single-substrate) into active site and finish the substrate conversion and enzyme regeneration. The detailed mechanisms of the well-studied reactions of peptide bond hydrolysis catalyzed by α-chymotrypsin and the glyceraldehyde-3-phosphate interconversion steps in glycolysis are in accordance with the proposed theoretical conclusions.

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Year:  2011        PMID: 21318350     DOI: 10.1007/s11010-011-0742-4

Source DB:  PubMed          Journal:  Mol Cell Biochem        ISSN: 0300-8177            Impact factor:   3.396


  13 in total

Review 1.  The depth of chemical time and the power of enzymes as catalysts.

Authors:  R Wolfenden; M J Snider
Journal:  Acc Chem Res       Date:  2001-12       Impact factor: 22.384

Review 2.  Structure, function, and evolution of phosphoglycerate mutases: comparison with fructose-2,6-bisphosphatase, acid phosphatase, and alkaline phosphatase.

Authors:  M J Jedrzejas
Journal:  Prog Biophys Mol Biol       Date:  2000       Impact factor: 3.667

3.  Computer simulation and analysis of the reaction pathway of triosephosphate isomerase.

Authors:  P A Bash; M J Field; R C Davenport; G A Petsko; D Ringe; M Karplus
Journal:  Biochemistry       Date:  1991-06-18       Impact factor: 3.162

4.  Translational motion of actin filaments in the presence of heavy meromyosin and MgATP as measured by Doppler broadening of laser light scattering.

Authors:  R Tirosh; W Z Low; A Oplatka
Journal:  Biochim Biophys Acta       Date:  1990-03-01

5.  Mechanism of adenosine triphosphate hydrolysis by actomyosin.

Authors:  R W Lymn; E W Taylor
Journal:  Biochemistry       Date:  1971-12-07       Impact factor: 3.162

Review 6.  The catalytic and regulatory properties of enzymes.

Authors:  D E Koshland; K E Neet
Journal:  Annu Rev Biochem       Date:  1968       Impact factor: 23.643

7.  Cooperativity of enzymatic reactions and molecular aspects of energy transduction.

Authors:  A G Fogel
Journal:  Mol Cell Biochem       Date:  1982-08-20       Impact factor: 3.396

8.  Structure of the triosephosphate isomerase-phosphoglycolohydroxamate complex: an analogue of the intermediate on the reaction pathway.

Authors:  R C Davenport; P A Bash; B A Seaton; M Karplus; G A Petsko; D Ringe
Journal:  Biochemistry       Date:  1991-06-18       Impact factor: 3.162

9.  Role of protein conformational mobility in enzyme catalysis: acylation of alpha-chymotrypsin by specific peptide substrates.

Authors:  Alvan C Hengge; Ross L Stein
Journal:  Biochemistry       Date:  2004-01-27       Impact factor: 3.162

10.  ADP dissociation from actomyosin subfragment 1 is sufficiently slow to limit the unloaded shortening velocity in vertebrate muscle.

Authors:  R F Siemankowski; M O Wiseman; H D White
Journal:  Proc Natl Acad Sci U S A       Date:  1985-02       Impact factor: 11.205

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