Literature DB >> 21317267

Cellulose- and xylan-degrading thermophilic anaerobic bacteria from biocompost.

M V Sizova1, J A Izquierdo, N S Panikov, L R Lynd.   

Abstract

Nine thermophilic cellulolytic clostridial isolates and four other noncellulolytic bacterial isolates were isolated from self-heated biocompost via preliminary enrichment culture on microcrystalline cellulose. All cellulolytic isolates grew vigorously on cellulose, with the formation of either ethanol and acetate or acetate and formate as principal fermentation products as well as lactate and glycerol as minor products. In addition, two out of nine cellulolytic strains were able to utilize xylan and pretreated wood with roughly the same efficiency as for cellulose. The major products of xylan fermentation were acetate and formate, with minor contributions of lactate and ethanol. Phylogenetic analyses of 16S rRNA and glycosyl hydrolase family 48 (GH48) gene sequences revealed that two xylan-utilizing isolates were related to a Clostridium clariflavum strain and represent a distinct novel branch within the GH48 family. Both isolates possessed high cellulase and xylanase activity induced independently by either cellulose or xylan. Enzymatic activity decayed after growth cessation, with more-rapid disappearance of cellulase activity than of xylanase activity. A mixture of xylan and cellulose was utilized simultaneously, with a significant synergistic effect observed as a reduction of lag phase in cellulose degradation.

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Year:  2011        PMID: 21317267      PMCID: PMC3067422          DOI: 10.1128/AEM.01219-10

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  37 in total

1.  Phylogenetic diversity of numerically important Arctic sea-ice bacteria cultured at subzero temperature.

Authors:  K Junge; F Imhoff; T Staley; J W Deming
Journal:  Microb Ecol       Date:  2002-03-13       Impact factor: 4.552

2.  Characterization of xylanolytic enzymes in Clostridium cellulovorans: expression of xylanase activity dependent on growth substrates.

Authors:  A Kosugi; K Murashima; R H Doi
Journal:  J Bacteriol       Date:  2001-12       Impact factor: 3.490

3.  Relationship of cellulosomal and noncellulosomal xylanases of Clostridium thermocellum to cellulose-degrading enzymes.

Authors:  E Morag; E A Bayer; R Lamed
Journal:  J Bacteriol       Date:  1990-10       Impact factor: 3.490

4.  Caldicellulosiruptor obsidiansis sp. nov., an anaerobic, extremely thermophilic, cellulolytic bacterium isolated from Obsidian Pool, Yellowstone National Park.

Authors:  Scott D Hamilton-Brehm; Jennifer J Mosher; Tatiana Vishnivetskaya; Mircea Podar; Sue Carroll; Steve Allman; Tommy J Phelps; Martin Keller; James G Elkins
Journal:  Appl Environ Microbiol       Date:  2009-12-18       Impact factor: 4.792

5.  Stable coexistence of five bacterial strains as a cellulose-degrading community.

Authors:  Souichiro Kato; Shin Haruta; Zong Jun Cui; Masaharu Ishii; Yasuo Igarashi
Journal:  Appl Environ Microbiol       Date:  2005-11       Impact factor: 4.792

6.  Isolation and characterization of oligotrophic acido-tolerant methanogenic consortia from a Sphagnum peat bog.

Authors:  Maria V Sizova; Nicolai S Panikov; Tatiana P Tourova; Patrick W Flanagan
Journal:  FEMS Microbiol Ecol       Date:  2003-08-01       Impact factor: 4.194

7.  A long-wavelength fluorescent substrate for continuous fluorometric determination of cellulase activity: resorufin-beta-D-cellobioside.

Authors:  Daniel J Coleman; Missy J Studler; John J Naleway
Journal:  Anal Biochem       Date:  2007-08-28       Impact factor: 3.365

8.  Bacterial cellulose hydrolysis in anaerobic environmental subsystems--Clostridium thermocellum and Clostridium stercorarium, thermophilic plant-fiber degraders.

Authors:  Vladimir V Zverlov; Wolfgang H Schwarz
Journal:  Ann N Y Acad Sci       Date:  2008-03       Impact factor: 5.691

9.  Identification, detection, and spatial resolution of Clostridium populations responsible for cellulose degradation in a methanogenic landfill leachate bioreactor.

Authors:  P C Burrell; C O'Sullivan; H Song; W P Clarke; L L Blackall
Journal:  Appl Environ Microbiol       Date:  2004-04       Impact factor: 4.792

10.  Hydrogenomics of the extremely thermophilic bacterium Caldicellulosiruptor saccharolyticus.

Authors:  Harmen J G van de Werken; Marcel R A Verhaart; Amy L VanFossen; Karin Willquist; Derrick L Lewis; Jason D Nichols; Heleen P Goorissen; Emmanuel F Mongodin; Karen E Nelson; Ed W J van Niel; Alfons J M Stams; Donald E Ward; Willem M de Vos; John van der Oost; Robert M Kelly; Servé W M Kengen
Journal:  Appl Environ Microbiol       Date:  2008-09-05       Impact factor: 4.792

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  35 in total

1.  New approaches for isolation of previously uncultivated oral bacteria.

Authors:  M V Sizova; T Hohmann; A Hazen; B J Paster; S R Halem; C M Murphy; N S Panikov; S S Epstein
Journal:  Appl Environ Microbiol       Date:  2011-11-04       Impact factor: 4.792

2.  Distinct roles for carbohydrate-binding modules of glycoside hydrolase 10 (GH10) and GH11 xylanases from Caldicellulosiruptor sp. strain F32 in thermostability and catalytic efficiency.

Authors:  Dong-Dong Meng; Yu Ying; Xiao-Hua Chen; Ming Lu; Kang Ning; Lu-Shan Wang; Fu-Li Li
Journal:  Appl Environ Microbiol       Date:  2015-01-09       Impact factor: 4.792

3.  Direct amplification of new cellulase genes from woodland soil purified DNA.

Authors:  Marco Cucurachi; Matteo Busconi; Mariangela Marudelli; Giovanna Soffritti; Corrado Fogher
Journal:  Mol Biol Rep       Date:  2013-05-05       Impact factor: 2.316

4.  Long-Term Enrichment on Cellulose or Xylan Causes Functional and Taxonomic Convergence of Microbial Communities from Anaerobic Digesters.

Authors:  Yangyang Jia; David Wilkins; Hongyuan Lu; Mingwei Cai; Patrick K H Lee
Journal:  Appl Environ Microbiol       Date:  2015-12-28       Impact factor: 4.792

5.  A novel bacterial GH30 xylobiohydrolase from Hungateiclostridium clariflavum.

Authors:  Katarína Šuchová; Vladimír Puchart; Peter Biely
Journal:  Appl Microbiol Biotechnol       Date:  2020-11-20       Impact factor: 4.813

6.  Caenorhabditis elegans battling starvation stress: low levels of ethanol prolong lifespan in L1 larvae.

Authors:  Paola V Castro; Shilpi Khare; Brian D Young; Steven G Clarke
Journal:  PLoS One       Date:  2012-01-18       Impact factor: 3.240

7.  Complete Genome Sequence of Clostridium clariflavum DSM 19732.

Authors:  Javier A Izquierdo; Lynne Goodwin; Karen W Davenport; Hazuki Teshima; David Bruce; Chris Detter; Roxanne Tapia; Shunsheng Han; Miriam Land; Loren Hauser; Cynthia D Jeffries; James Han; Sam Pitluck; Matt Nolan; Amy Chen; Marcel Huntemann; Konstantinos Mavromatis; Natalia Mikhailova; Konstantinos Liolios; Tanja Woyke; Lee R Lynd
Journal:  Stand Genomic Sci       Date:  2012-03-12

8.  Whole-Genome Sequence Data Analysis of Anoxybacillus kamchatkensis NASTPD13 Isolated from Hot Spring of Myagdi, Nepal.

Authors:  Punam Yadav; Shikha Sharma; Tribikram Bhattarai; Lakshmaiah Sreerama; Gandham S Prasad; Girish Sahni; Jyoti Maharjan
Journal:  Biomed Res Int       Date:  2021-06-27       Impact factor: 3.411

9.  Metabolic adaption of ethanol-tolerant Clostridium thermocellum.

Authors:  Xinshu Zhu; Jiatao Cui; Yingang Feng; Yun Fa; Jingtao Zhang; Qiu Cui
Journal:  PLoS One       Date:  2013-07-30       Impact factor: 3.240

10.  A coarse-grained model for synergistic action of multiple enzymes on cellulose.

Authors:  Andrea Asztalos; Marcus Daniels; Anurag Sethi; Tongye Shen; Paul Langan; Antonio Redondo; Sandrasegaram Gnanakaran
Journal:  Biotechnol Biofuels       Date:  2012-08-01       Impact factor: 6.040

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