Literature DB >> 21315086

Energetics of SecA dimerization.

Andy J Wowor1, Dongmei Yu, Debra A Kendall, James L Cole.   

Abstract

Transport of many proteins to extracytoplasmic locations occurs via the general secretion (Sec) pathway. In Escherichia coli, this pathway is composed of the SecYEG protein-conducting channel and the SecA ATPase. SecA plays a central role in binding the signal peptide region of preproteins, directing preproteins to membrane-bound SecYEG and promoting translocation coupled with ATP hydrolysis. Although it is well established that SecA is crucial for preprotein transport and thus cell viability, its oligomeric state during different stages of transport remains ill defined. We have characterized the energetics of SecA dimerization as a function of salt concentration and temperature and defined the linkage of SecA dimerization and signal peptide binding using analytical ultracentrifugation. The use of a new fluorescence detector permitted an analysis of SecA dimerization down to concentrations as low as 50 nM. The dimer dissociation constants are strongly dependent on salt. Linkage analysis indicates that SecA dimerization is coupled to the release of about five ions, demonstrating that electrostatic interactions play an important role in stabilizing the SecA dimer interface. Binding of signal peptide reduces SecA dimerization affinity, such that K(d) increases about 9-fold from 0.28 μM in the absence of peptide to 2.68 μM in the presence of peptide. The weakening of the SecA dimer that accompanies signal peptide binding may poise the SecA dimer to dissociate upon binding to SecYEG.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21315086      PMCID: PMC3070768          DOI: 10.1016/j.jmb.2011.02.006

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  79 in total

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Authors:  W F Stafford
Journal:  Anal Biochem       Date:  1992-06       Impact factor: 3.365

2.  Characterization of membrane-associated and soluble states of SecA protein from wild-type and SecA51(TS) mutant strains of Escherichia coli.

Authors:  R J Cabelli; K M Dolan; L P Qian; D B Oliver
Journal:  J Biol Chem       Date:  1991-12-25       Impact factor: 5.157

3.  Determination of a region in SecA that interacts with presecretory proteins in Escherichia coli.

Authors:  E Kimura; M Akita; S Matsuyama; S Mizushima
Journal:  J Biol Chem       Date:  1991-04-05       Impact factor: 5.157

4.  Preferential labeling of alpha-amino N-terminal groups in peptides by biotin: application to the detection of specific anti-peptide antibodies by enzyme immunoassays.

Authors:  I Sélo; L Négroni; C Créminon; J Grassi; J M Wal
Journal:  J Immunol Methods       Date:  1996-12-15       Impact factor: 2.303

5.  SecA, the peripheral subunit of the Escherichia coli precursor protein translocase, is functional as a dimer.

Authors:  A J Driessen
Journal:  Biochemistry       Date:  1993-12-07       Impact factor: 3.162

6.  SecA membrane cycling at SecYEG is driven by distinct ATP binding and hydrolysis events and is regulated by SecD and SecF.

Authors:  A Economou; J A Pogliano; J Beckwith; D B Oliver; W Wickner
Journal:  Cell       Date:  1995-12-29       Impact factor: 41.582

7.  SecA promotes preprotein translocation by undergoing ATP-driven cycles of membrane insertion and deinsertion.

Authors:  A Economou; W Wickner
Journal:  Cell       Date:  1994-09-09       Impact factor: 41.582

8.  Two distinct ATP-binding domains are needed to promote protein export by Escherichia coli SecA ATPase.

Authors:  C Mitchell; D Oliver
Journal:  Mol Microbiol       Date:  1993-11       Impact factor: 3.501

9.  Analysis of equilibrium and kinetic measurements to determine thermodynamic origins of stability and specificity and mechanism of formation of site-specific complexes between proteins and helical DNA.

Authors:  M T Record; J H Ha; M A Fisher
Journal:  Methods Enzymol       Date:  1991       Impact factor: 1.600

10.  SecA protein needs both acidic phospholipids and SecY/E protein for functional high-affinity binding to the Escherichia coli plasma membrane.

Authors:  J P Hendrick; W Wickner
Journal:  J Biol Chem       Date:  1991-12-25       Impact factor: 5.157

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  17 in total

1.  Two copies of the SecY channel and acidic lipids are necessary to activate the SecA translocation ATPase.

Authors:  Kush Dalal; Catherine S Chan; Stephen G Sligar; Franck Duong
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-29       Impact factor: 11.205

2.  Stabilization of SecA ATPase by the primary cytoplasmic salt of Escherichia coli.

Authors:  Guillaume Roussel; Eric Lindner; Stephen H White
Journal:  Protein Sci       Date:  2019-05-01       Impact factor: 6.725

3.  ADP-dependent conformational changes distinguish Mycobacterium tuberculosis SecA2 from SecA1.

Authors:  Nadia G D'Lima; Carolyn M Teschke
Journal:  J Biol Chem       Date:  2013-12-02       Impact factor: 5.157

4.  A Naturally Occurring Repeat Protein with High Internal Sequence Identity Defines a New Class of TPR-like Proteins.

Authors:  Jacob D Marold; Jennifer M Kavran; Gregory D Bowman; Doug Barrick
Journal:  Structure       Date:  2015-10-01       Impact factor: 5.006

5.  The use of analytical sedimentation velocity to extract thermodynamic linkage.

Authors:  James L Cole; John J Correia; Walter F Stafford
Journal:  Biophys Chem       Date:  2011-05-27       Impact factor: 2.352

Review 6.  The Sec System: Protein Export in Escherichia coli.

Authors:  Jennine M Crane; Linda L Randall
Journal:  EcoSal Plus       Date:  2017-11

7.  Structural studies of a signal peptide in complex with signal peptidase I cytoplasmic domain: the stabilizing effect of membrane-mimetics on the acquired fold.

Authors:  Paolo De Bona; Lalit Deshmukh; Vitaliy Gorbatyuk; Olga Vinogradova; Debra A Kendall
Journal:  Proteins       Date:  2011-11-24

8.  Defining the Escherichia coli SecA dimer interface residues through in vivo site-specific photo-cross-linking.

Authors:  Dongmei Yu; Andy J Wowor; James L Cole; Debra A Kendall
Journal:  J Bacteriol       Date:  2013-04-12       Impact factor: 3.490

9.  Defining the solution state dimer structure of Escherichia coli SecA using Förster resonance energy transfer.

Authors:  Sarah M Auclair; Donald B Oliver; Ishita Mukerji
Journal:  Biochemistry       Date:  2013-03-29       Impact factor: 3.162

10.  On the utility of fluorescence-detection analytical ultracentrifugation in probing biomolecular interactions in complex solutions: a case study in milk.

Authors:  Jennifer M Crowther; Marita Broadhurst; Thomas M Laue; Geoffrey B Jameson; Alison J Hodgkinson; Renwick C J Dobson
Journal:  Eur Biophys J       Date:  2020-10-14       Impact factor: 1.733

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