Literature DB >> 21311107

HBV core region variability: effect of antiviral treatments on main epitopic regions.

Maria Homs1, Rosendo Jardi, Maria Buti, Melanie Schaper, David Tabernero, Pilar Fernandez-Fernandez, Josep Quer, Rafael Esteban, Francisco Rodriguez-Frias.   

Abstract

BACKGROUND: Amino acid (AA) changes in specific hepatitis B core antigen (HBcAg) regions were assessed in patients infected with chronic hepatitis B (CHB) after a 12-month untreated period and after receiving antiviral therapy (interferon, lamivudine or adefovir dipivoxil), and in inactive hepatitis B surface antigen-positive carriers.
METHODS: Samples corresponding to different time points in 76 CHB cases (64 on-treatment) and 4 inactive carriers were included. The main precore mutation, T-helper immunodominant epitope at AA 50-69 (Th50-69), minor T-helper epitope (Th28-47), B-cell immunodominant epitope (B74-84) and a conserved region of HBcAg at AA 1-11 (AA1-11) were directly sequenced. For comparisons, the average number of AA changes in each region was standardized to 12 months (Av12).
RESULTS: AA changes clustered mainly in immunodominant regions (69%). The highest percentage of cases (%n) with changes and highest Av12 changes were detected after interferon treatment (%n=73%, Av12=3.1 in Th50-69 and %n=86%, Av12=2.7 in B74-84). At baseline, immunodominant regions had higher Av12 changes in hepatitis B e antigen-negative patients and those with main precore mutations. Changes in the Th28-47 region were more frequent after nucleoside/nucleotide analogue treatment (40%) than before treatment (9%). Codons 74 and 77 were the most polymorphic, and the double change E64D-N67T was significantly observed. Codon 84 substitutions were mainly associated with interferon treatment (P=0.05).
CONCLUSIONS: Natural and treatment-induced substitutions in HBV core protein, occurring especially with interferon treatment, were characterized. Some immune-stimulating activity related to the minor Th28-47 epitope might be associated with nucleoside/nucleotide analogues; this activity was also seen in inactive carriers.

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Year:  2011        PMID: 21311107     DOI: 10.3851/IMP1701

Source DB:  PubMed          Journal:  Antivir Ther        ISSN: 1359-6535


  7 in total

1.  Assessing sequence plasticity of a virus-like nanoparticle by evolution toward a versatile scaffold for vaccines and drug delivery.

Authors:  Yuan Lu; Wei Chan; Benjamin Y Ko; Christopher C VanLang; James R Swartz
Journal:  Proc Natl Acad Sci U S A       Date:  2015-09-21       Impact factor: 11.205

2.  Characterization of Full-Length Genomes of Hepatitis B Virus Quasispecies in Sera of Patients at Different Phases of Infection.

Authors:  Zhi-Tao Yang; Su-Yuan Huang; Li Chen; Feng Liu; Xiao-Hui Cai; Yang-Fan Guo; Ming-Jie Wang; Yue Han; De-Min Yu; Jie-Hong Jiang; Dong-Hua Zhang; Qi-Ming Gong; Guo-Qing Zhang; Guo-Qing Zang; Zhong-Hua Lu; Li-Hua Huang; Xin-Xin Zhang
Journal:  J Clin Microbiol       Date:  2015-04-29       Impact factor: 5.948

3.  Naturally occurring core immune-escape and carboxy-terminal mutations\truncations in patients with e antigen negative chronic hepatitis B.

Authors:  Ranjit Chauhan; Shiv K Sarin; Manoj Kumar; Jayashree Bhattacharjee
Journal:  Hepatol Int       Date:  2011-12-02       Impact factor: 6.047

4.  Quasispecies dynamics in main core epitopes of hepatitis B virus by ultra-deep-pyrosequencing.

Authors:  Maria Homs; Maria Buti; David Tabernero; Josep Quer; Alex Sanchez; Noelia Corral; Rafael Esteban; Francisco Rodriguez-Frias
Journal:  World J Gastroenterol       Date:  2012-11-14       Impact factor: 5.742

Review 5.  Quasispecies structure, cornerstone of hepatitis B virus infection: mass sequencing approach.

Authors:  Francisco Rodriguez-Frias; Maria Buti; David Tabernero; Maria Homs
Journal:  World J Gastroenterol       Date:  2013-11-07       Impact factor: 5.742

6.  Clinical application of estimating hepatitis B virus quasispecies complexity by massive sequencing: correlation between natural evolution and on-treatment evolution.

Authors:  Maria Homs; Andrea Caballero; Josep Gregori; David Tabernero; Josep Quer; Leonardo Nieto; Rafael Esteban; Maria Buti; Francisco Rodriguez-Frias
Journal:  PLoS One       Date:  2014-11-13       Impact factor: 3.240

7.  The Correlation Between Hepatitis B Virus Precore/Core Mutations and the Progression of Severe Liver Disease.

Authors:  Ahmed A Al-Qahtani; Mashael R Al-Anazi; Nyla Nazir; Ayman A Abdo; Faisal M Sanai; Waleed K Al-Hamoudi; Khalid A Alswat; Hamad I Al-Ashgar; Mohammed Q Khan; Ali Albenmousa; Ahmed El-Shamy; Salah K Alanazi; Damian Dela Cruz; Marie Fe F Bohol; Mohammed N Al-Ahdal
Journal:  Front Cell Infect Microbiol       Date:  2018-10-22       Impact factor: 5.293

  7 in total

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