Literature DB >> 21307208

Standardization of hepatitis E virus (HEV) nucleic acid amplification technique-based assays: an initial study to evaluate a panel of HEV strains and investigate laboratory performance.

Sally A Baylis1, Kay-Martin Hanschmann, Johannes Blümel, C Micha Nübling.   

Abstract

The performance of hepatitis E virus (HEV) RNA nucleic acid amplification (NAT)-based assays has been investigated using a panel of HEV-containing plasma samples. The panel comprised 22 HEV-positive plasma samples representing 10-fold serial dilutions of HEV genotypes 3a, 3b, 3f, and 4c obtained from blood donors. Two negative-control plasma samples were included. All samples were blinded. The plasma samples were prepared as liquid/frozen materials and distributed to participants on dry ice. Laboratories were requested to test the panel using their routine HEV assays and to score samples as either positive or negative and could optionally return data in copies/ml for HEV RNA. Twenty laboratories from 10 different countries participated in the study. Data were returned by all participating laboratories; 10 laboratories returned quantitative data. All assays except one were developed in-house using conventional or real-time reverse transcriptase PCR (RT-PCR) methodologies. There was a 100- to 1,000-fold difference in sensitivity between the majority of assays, independent of the virus strain. Although the quantitative data were limited, for the samples in the range of ∼6 to 4 log(10) copies/ml, the standard deviations of the geometric means of the samples ranged between 0.38 and 1.09. Except for one equivocal result, HEV RNA was not detected in the negative samples. The variability of assay sensitivity highlights the need for the standardization of HEV RNA NAT assays.

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Year:  2011        PMID: 21307208      PMCID: PMC3122834          DOI: 10.1128/JCM.02578-10

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  19 in total

1.  Transfusion-transmitted hepatitis E in a 'nonhyperendemic' country.

Authors:  E Boxall; A Herborn; G Kochethu; G Pratt; D Adams; S Ijaz; C-G Teo
Journal:  Transfus Med       Date:  2006-04       Impact factor: 2.019

2.  A broadly reactive one-step real-time RT-PCR assay for rapid and sensitive detection of hepatitis E virus.

Authors:  Narayanan Jothikumar; Theresa L Cromeans; Betty H Robertson; X J Meng; Vincent R Hill
Journal:  J Virol Methods       Date:  2005-08-24       Impact factor: 2.014

3.  Universal detection of hepatitis E virus by two real-time PCR assays: TaqMan and Primer-Probe Energy Transfer.

Authors:  Péter Gyarmati; Nahla Mohammed; Helene Norder; Jonas Blomberg; Sándor Belák; Frederik Widén
Journal:  J Virol Methods       Date:  2007-09-06       Impact factor: 2.014

4.  Hepatitis E virus and chronic hepatitis in organ-transplant recipients.

Authors:  Nassim Kamar; Janick Selves; Jean-Michel Mansuy; Leila Ouezzani; Jean-Marie Péron; Joëlle Guitard; Olivier Cointault; Laure Esposito; Florence Abravanel; Marie Danjoux; Dominique Durand; Jean-Pierre Vinel; Jacques Izopet; Lionel Rostaing
Journal:  N Engl J Med       Date:  2008-02-21       Impact factor: 91.245

5.  Transfusion-transmitted hepatitis E caused by apparently indigenous hepatitis E virus strain in Hokkaido, Japan.

Authors:  Keiji Matsubayashi; Yasuhiro Nagaoka; Hidekatsu Sakata; Shinichiro Sato; Kanji Fukai; Toshiaki Kato; Kazuaki Takahashi; Shunji Mishiro; Mitsunobu Imai; Naokazu Takeda; Hisami Ikeda
Journal:  Transfusion       Date:  2004-06       Impact factor: 3.157

Review 6.  Hepatitis E: an emerging awareness of an old disease.

Authors:  R H Purcell; S U Emerson
Journal:  J Hepatol       Date:  2008-01-02       Impact factor: 25.083

7.  A case of transfusion-transmitted hepatitis E caused by blood from a donor infected with hepatitis E virus via zoonotic food-borne route.

Authors:  Keiji Matsubayashi; Jong-Hon Kang; Hidekatsu Sakata; Kazuaki Takahashi; Motohiro Shindo; Masaru Kato; Shinichiro Sato; Toshiaki Kato; Hiroyuki Nishimori; Kunihiko Tsuji; Hiroyuki Maguchi; Jun-Ichi Yoshida; Hiroshi Maekubo; Shunji Mishiro; Hisami Ikeda
Journal:  Transfusion       Date:  2008-07       Impact factor: 3.157

8.  Profile of acute infectious markers in sporadic hepatitis E.

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9.  Transfusion-associated hepatitis E, France.

Authors:  Philippe Colson; Carole Coze; Pierre Gallian; Mireille Henry; Philippe De Micco; Catherine Tamalet
Journal:  Emerg Infect Dis       Date:  2007-04       Impact factor: 6.883

10.  Hepatitis E virus genotype 3 diversity, France.

Authors:  Florence Legrand-Abravanel; Jean-Michel Mansuy; Martine Dubois; Nassim Kamar; Jean-Marie Peron; Lionel Rostaing; Jacques Izopet
Journal:  Emerg Infect Dis       Date:  2009-01       Impact factor: 6.883

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  43 in total

1.  Genotype 3 diversity and quantification of hepatitis E virus RNA.

Authors:  Florence Abravanel; Karine Sandres-Saune; Sebastien Lhomme; Martine Dubois; Jean-Michel Mansuy; Jacques Izopet
Journal:  J Clin Microbiol       Date:  2012-01-11       Impact factor: 5.948

Review 2.  Hepatitis E: an old infection with new implications.

Authors:  Giuseppe Marano; Stefania Vaglio; Simonetta Pupella; Giuseppina Facco; Maria Bianchi; Gabriele Calizzani; Fabio Candura; Liviana Catalano; Blandina Farina; Monica Lanzoni; Vanessa Piccinini; Giancarlo M Liumbruno; Giuliano Grazzini
Journal:  Blood Transfus       Date:  2014-09-12       Impact factor: 3.443

3.  Serologic evidence for hepatitis E virus infection among patients with undifferentiated acute febrile illness in Kibera, Kenya.

Authors:  N W Furukawa; E H Teshale; L Cosmas; M Ochieng; S Gikunju; B S Fields; J M Montgomery
Journal:  J Clin Virol       Date:  2016-02-23       Impact factor: 3.168

4.  Hepatitis E Virus.

Authors:  Georg Pauli; Martin Aepfelbacher; Ursula Bauerfeind; Johannes Blümel; Reinhard Burger; Barbara Gärtner; Albrecht Gröner; Lutz Gürtler; Margarethe Heiden; Martin Hildebrandt; Bernd Jansen; Ruth Offergeld; Uwe Schlenkrich; Volkmar Schottstedt; Rainer Seitz; Johanna Strobel; Hannelore Willkommen; Sally A Baylis
Journal:  Transfus Med Hemother       Date:  2015-06-01       Impact factor: 3.747

Review 5.  Chronic hepatitis e virus infection and treatment.

Authors:  Nassim Kamar; Jacques Izopet; Harry R Dalton
Journal:  J Clin Exp Hepatol       Date:  2013-05-25

6.  Hepatitis e virus: current concepts and future perspectives.

Authors:  Harry R Dalton; Suzan D Pas; Richie G Madden; Annemiek A van der Eijk
Journal:  Curr Infect Dis Rep       Date:  2014-04       Impact factor: 3.725

Review 7.  Chronic hepatitis E: A brief review.

Authors:  Arvind R Murali; Vikram Kotwal; Saurabh Chawla
Journal:  World J Hepatol       Date:  2015-09-08

8.  Comparison of real-time reverse transcriptase PCR assays for detection of swine hepatitis E virus in fecal samples.

Authors:  Priscilla F Gerber; Chao-Ting Xiao; Dianjun Cao; Xiang-Jin Meng; Tanja Opriessnig
Journal:  J Clin Microbiol       Date:  2014-01-15       Impact factor: 5.948

9.  Probable transmission of hepatitis E virus (HEV) via transfusion in the United States.

Authors:  John R Ticehurst; Nora Pisanic; Michael S Forman; Carly Ordak; Christopher D Heaney; Edgar Ong; Jeffrey M Linnen; Paul M Ness; Nan Guo; Hua Shan; Kenrad E Nelson
Journal:  Transfusion       Date:  2019-01-31       Impact factor: 3.157

Review 10.  Autochthonous hepatitis e virus infections: a new transfusion-associated risk?

Authors:  Jens Dreier; David Juhl
Journal:  Transfus Med Hemother       Date:  2013-12-30       Impact factor: 3.747

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