Literature DB >> 21305694

Fabrication of DNA polymer brush arrays by destructive micropatterning and rolling-circle amplification.

Kristopher D Barbee1, Matt Chandrangsu, Xiaohua Huang.   

Abstract

A method for fabricating DNA polymer brush arrays using photolithography and plasma etching followed by solid-phase enzymatic DNA amplification is reported. After attaching oligonucleotide primers to the surface of a glass coverslip, a thin layer of photoresist is spin-coated on the glass and patterned via photolithography to generate an array of posts in the resist. An oxygen-based plasma is then used to destroy the exposed oligonucleotide primers. The glass coverslip with the primer array is assembled into a microfluidic chip and DNA polymer brushes are synthesized on the oligonucleotide array by rolling-circle DNA amplification. We have demonstrated that the linear polymers can be rapidly synthesized in situ with a high degree of control over their density and length.
Copyright © 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2011        PMID: 21305694      PMCID: PMC3092525          DOI: 10.1002/mabi.201000373

Source DB:  PubMed          Journal:  Macromol Biosci        ISSN: 1616-5187            Impact factor:   4.979


  39 in total

1.  In situ localized amplification and contact replication of many individual DNA molecules.

Authors:  R D Mitra; G M Church
Journal:  Nucleic Acids Res       Date:  1999-12-15       Impact factor: 16.971

Review 2.  Applications of polymer brushes in protein analysis and purification.

Authors:  Parul Jain; Gregory L Baker; Merlin L Bruening
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2009       Impact factor: 10.745

3.  Nucleic acid sensing by regenerable surface-associated isothermal rolling circle amplification.

Authors:  Erik L McCarthy; Lee E Bickerstaff; Mauricio Pereira da Cunha; Paul J Millard
Journal:  Biosens Bioelectron       Date:  2006-06-23       Impact factor: 10.618

Review 4.  Printing your own inkjet microarrays.

Authors:  Christopher G Lausted; Charles B Warren; Leroy E Hood; Stephen R Lasky
Journal:  Methods Enzymol       Date:  2006       Impact factor: 1.600

5.  Spatially resolved DNA brushes on a chip: gene activation by enzymatic cascade.

Authors:  Maya Bar; Roy H Bar-Ziv
Journal:  Nano Lett       Date:  2009-12       Impact factor: 11.189

6.  Multiplexed biochemical assays with biological chips.

Authors:  S P Fodor; R P Rava; X C Huang; A C Pease; C P Holmes; C L Adams
Journal:  Nature       Date:  1993-08-05       Impact factor: 49.962

7.  Mutation detection and single-molecule counting using isothermal rolling-circle amplification.

Authors:  P M Lizardi; X Huang; Z Zhu; P Bray-Ward; D C Thomas; D C Ward
Journal:  Nat Genet       Date:  1998-07       Impact factor: 38.330

8.  Global analysis of protein activities using proteome chips.

Authors:  H Zhu; M Bilgin; R Bangham; D Hall; A Casamayor; P Bertone; N Lan; R Jansen; S Bidlingmaier; T Houfek; T Mitchell; P Miller; R A Dean; M Gerstein; M Snyder
Journal:  Science       Date:  2001-07-26       Impact factor: 47.728

9.  Quantitative monitoring of gene expression patterns with a complementary DNA microarray.

Authors:  M Schena; D Shalon; R W Davis; P O Brown
Journal:  Science       Date:  1995-10-20       Impact factor: 47.728

10.  "Dip-Pen" nanolithography

Authors: 
Journal:  Science       Date:  1999-01-29       Impact factor: 47.728

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  2 in total

Review 1.  Sample pretreatment and nucleic acid-based detection for fast diagnosis utilizing microfluidic systems.

Authors:  Jung-Hao Wang; Chih-Hung Wang; Gwo-Bin Lee
Journal:  Ann Biomed Eng       Date:  2011-12-07       Impact factor: 3.934

2.  Biorecognition by DNA oligonucleotides after exposure to photoresists and resist removers.

Authors:  Stacey L Dean; Thomas J Morrow; Susan Patrick; Mingwei Li; Gary A Clawson; Theresa S Mayer; Christine D Keating
Journal:  Langmuir       Date:  2013-08-29       Impact factor: 3.882

  2 in total

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