Literature DB >> 21301095

Crystallization, X-ray diffraction analysis and preliminary structure determination of the TIR domain from the flax resistance protein L6.

Thomas Ve1, Simon Williams, Eugene Valkov, Jeffrey G Ellis, Peter N Dodds, Bostjan Kobe.   

Abstract

The Toll/interleukin-1 receptor (TIR) domain is a protein-protein interaction domain that is found in both animal and plant immune receptors. In animal Toll-like receptor signalling, both homotypic TIR-domain interactions between two receptor molecules and heterotypic interactions between receptors and TIR-domain-containing adaptors are required for initiation of an innate immune response. The TIR domains in cytoplasmic nucleotide-binding/leucine-rich repeat (NB-LRR) plant disease-resistance proteins are not as well characterized, but recent studies have suggested a role in defence signalling. In this study, the crystallization, X-ray diffraction analysis and preliminary structure determination of the TIR domain from the flax resistance protein L6 (L6TIR) are reported. Plate-like crystals of L6TIR were obtained using PEG 200 as a precipitant and diffracted X-rays to 2.3 Å resolution. Pseudo-translation complicated the initial assignment of the crystal symmetry, which was ultimately found to correspond to space group P2(1)2(1)2 with two molecules per asymmetric unit. The structure of L6TIR was solved by molecular replacement using the structure of the TIR-domain-containing protein AT1G72930 from Arabidopsis as a template.

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Year:  2011        PMID: 21301095      PMCID: PMC3034617          DOI: 10.1107/S1744309110051006

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  40 in total

Review 1.  STANDing strong, resistance proteins instigators of plant defence.

Authors:  Ewa Lukasik; Frank L W Takken
Journal:  Curr Opin Plant Biol       Date:  2009-04-24       Impact factor: 7.834

2.  The crystal structure of a TIR domain from Arabidopsis thaliana reveals a conserved helical region unique to plants.

Authors:  Siew Leong Chan; Takashi Mukasa; Eugenio Santelli; Lieh Yoon Low; Jaime Pascual
Journal:  Protein Sci       Date:  2010-01       Impact factor: 6.725

3.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

4.  The Arabidopsis thaliana TIR-NB-LRR R-protein, RPP1A; protein localization and constitutive activation of defence by truncated alleles in tobacco and Arabidopsis.

Authors:  L Michael Weaver; Michal R Swiderski; Yan Li; Jonathan D G Jones
Journal:  Plant J       Date:  2006-08-02       Impact factor: 6.417

5.  Direct interaction between the tobacco mosaic virus helicase domain and the ATP-bound resistance protein, N factor during the hypersensitive response in tobacco plants.

Authors:  Hirokazu Ueda; Yube Yamaguchi; Hiroshi Sano
Journal:  Plant Mol Biol       Date:  2006-05       Impact factor: 4.076

6.  Activation of an Arabidopsis resistance protein is specified by the in planta association of its leucine-rich repeat domain with the cognate oomycete effector.

Authors:  Ksenia V Krasileva; Douglas Dahlbeck; Brian J Staskawicz
Journal:  Plant Cell       Date:  2010-07-02       Impact factor: 11.277

7.  Structural basis for signal transduction by the Toll/interleukin-1 receptor domains.

Authors:  Y Xu; X Tao; B Shen; T Horng; R Medzhitov; J L Manley; L Tong
Journal:  Nature       Date:  2000-11-02       Impact factor: 49.962

8.  Crystal structures of flax rust avirulence proteins AvrL567-A and -D reveal details of the structural basis for flax disease resistance specificity.

Authors:  Ching-I A Wang; Gregor Guncar; Jade K Forwood; Trazel Teh; Ann-Maree Catanzariti; Gregory J Lawrence; Fionna E Loughlin; Joel P Mackay; Horst Joachim Schirra; Peter A Anderson; Jeffrey G Ellis; Peter N Dodds; Bostjan Kobe
Journal:  Plant Cell       Date:  2007-09-14       Impact factor: 11.277

9.  Tobacco transgenic for the flax rust resistance gene L expresses allele-specific activation of defense responses.

Authors:  Donna Frost; Heather Way; Paul Howles; Joanne Luck; John Manners; Adrienne Hardham; Jean Finnegan; Jeff Ellis
Journal:  Mol Plant Microbe Interact       Date:  2004-02       Impact factor: 4.171

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  2 in total

1.  Crystallization and preliminary X-ray diffraction analysis of the flax cytokinin oxidase LuCKX1.1.

Authors:  Li Wan; Simon J Williams; Xiaoxiao Zhang; Daniel J Ericsson; Markus Koeck; Peter N Dodds; Jeffrey G Ellis; Bostjan Kobe
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-09-28

2.  Structural and functional analysis of a plant resistance protein TIR domain reveals interfaces for self-association, signaling, and autoregulation.

Authors:  Maud Bernoux; Thomas Ve; Simon Williams; Christopher Warren; Danny Hatters; Eugene Valkov; Xiaoxiao Zhang; Jeffrey G Ellis; Bostjan Kobe; Peter N Dodds
Journal:  Cell Host Microbe       Date:  2011-03-17       Impact factor: 21.023

  2 in total

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