Literature DB >> 21298666

A PCR amplification method without DNA extraction.

Hongwei Li1, Haiyue Xu, Chunjiang Zhao, Yiming Sulaiman, Changxin Wu.   

Abstract

To develop a simple and inexpensive method for direct PCR amplification of animal DNA from tissues, we optimized different components and their concentration in lysis buffer systems. Finally, we acquired the optimized buffer system composed of 10 mmol tris(hydroxymethyl)aminomethane (Tris)-Cl (pH 8.0), 2 mmol ethylene diamine tetraacetic (EDTA) (pH 8.0), 0.2 mol NaCl and 200 μg/mL Proteinase K. Interestingly, the optimized buffer is also very effective when working with common human sample types, including blood, buccal cells and hair. The direct PCR method requires fewer reagents (Tris-Cl, EDTA, Protease K and NaCl) and less incubation time (only 35 min). The cost of treating every sample is less than $0.02, and all steps can be completed on a thermal cycler in a 96-well format. So, the proposed method will significantly improve high-throughput PCR-based molecular assays in animal systems and in common human sample types.
Copyright © 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2011        PMID: 21298666     DOI: 10.1002/elps.201000392

Source DB:  PubMed          Journal:  Electrophoresis        ISSN: 0173-0835            Impact factor:   3.535


  3 in total

1.  Designing, optimization, and validation of whole blood direct T-ARMS PCR for precise and rapid genotyping of complex vertebral malformation in cattle.

Authors:  R R Alyethodi; U Singh; S Kumar; R Alex; G S Sengar; T V Raja; R Deb; B Prakash
Journal:  BMC Biotechnol       Date:  2021-05-22       Impact factor: 2.563

2.  Application of a cost-effective DNA extraction protocol for screening transgenic and CRISPR-edited primary goat cells.

Authors:  Louhanna Pinheiro Rodrigues Teixeira; Francisco Eder de Moura Lopes; André Saraiva Leão Marcelo Antunes; Matheus Soares Alves; André Marrocos Miranda; Saul Gaudencio Neto; Leonardo Tondello Martins; Ana Cristina de Oliveira Monteiro Moreira; Kaio Cesar Simiano Tavares
Journal:  PLoS One       Date:  2020-09-18       Impact factor: 3.240

3.  Direct LAMP Assay without Prior DNA Purification for Sex Determination of Papaya.

Authors:  Chi-Chu Tsai; Huei-Chuan Shih; Ya-Zhu Ko; Ren-Huang Wang; Shu-Ju Li; Yu-Chung Chiang
Journal:  Int J Mol Sci       Date:  2016-09-24       Impact factor: 5.923

  3 in total

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